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ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00160
Bact-VirALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00160
Identity
- Kingdom:
- phage
Quality
87.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-63
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7qocA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.55 | 38.0 | 2.67e-01 | 72.9% | 56.1% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.52 | 39.0 | 2.62e-01 | 86.4% | 35.7% |
| 3ss3C02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 39.0 | 2.50e-01 | 83.1% | 58.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3684442 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 51.0 | 4.57e-01 | 91.5% | 70.6% |
| 3246264 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 50.0 | 5.22e-01 | 98.3% | 96.4% |
| 3255630 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 39.0 | 3.89e-01 | 78.0% | 65.0% |
| 5071173 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.59 | 47.0 | 3.06e-01 | 91.5% | 35.3% |
| None | — | 0.58 | 48.0 | 2.84e-01 | 93.2% | 21.8% | |
| 3622513 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 47.0 | 4.69e-01 | 100.0% | 95.0% |
| 3385651 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 42.0 | 3.11e-01 | 86.4% | 37.8% |
| 3611713 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.55 | 44.0 | 4.29e-01 | 89.8% | 87.7% |
| 3716864 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 44.0 | 4.33e-01 | 94.9% | 86.2% |
| 3255275 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 37.0 | 3.68e-01 | 98.3% | 75.0% |
| 5035755 | 2004.1.1.188 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 | 0.52 | 43.0 | 3.21e-01 | 98.3% | 68.5% |
| 3948935 | 7048.1.1.1 ↗ | a+b complex topology › head domain of ScoMcrA › head domain of ScoMcrA › head domain of ScoMcrA › ScoMcrA_N | 0.51 | 42.0 | 3.82e-01 | 96.6% | 68.2% |
| 4097425 | 4973.1.1.1 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind | 0.50 | 34.0 | 3.33e-01 | 81.4% | 64.6% |