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ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00170
Bact-VirALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00170
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-144
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 27.0 | 3.71e-01 | 89.3% | 92.4% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 40.0 | 4.42e-01 | 85.0% | 93.8% |
| 4fchA01 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 30.0 | 3.30e-01 | 78.6% | 66.1% |
| 1yloE02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.53 | 32.0 | 4.05e-01 | 83.6% | 100.0% |
| 3licA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 31.0 | 3.68e-01 | 80.7% | 94.3% |
| 4fczA00 | 3.10.450.710 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC | 0.50 | 35.0 | 3.22e-01 | 70.0% | 81.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4989092 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.59 | 37.0 | 4.23e-01 | 80.7% | 83.8% |
| 4938361 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.57 | 36.0 | 3.69e-01 | 78.6% | 63.6% |
| 5063919 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.56 | 39.0 | 4.14e-01 | 79.3% | 81.7% |
| 5038846 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.56 | 38.0 | 3.87e-01 | 80.0% | 69.3% |
| 3977220 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.56 | 48.0 | 3.92e-01 | 93.6% | 88.1% |
| 4957638 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 38.0 | 4.19e-01 | 79.3% | 87.0% |
| 1220306 | 3597.1.1.1 ↗ | beta sandwiches › Starch specific carbohydrate-binding modules › Starch specific carbohydrate-binding modules › Starch specific carbohydrate-binding modules › SusF_SusE | 0.55 | 30.0 | 3.38e-01 | 81.4% | 66.4% |
| 4951354 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.55 | 37.0 | 4.02e-01 | 79.3% | 81.7% |
| 4944619 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 37.0 | 3.43e-01 | 79.3% | 55.2% |
| 4957167 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.53 | 37.0 | 3.09e-01 | 78.6% | 41.6% |
| 4927417 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.52 | 44.0 | 3.77e-01 | 93.6% | 90.4% |
| 2057235 | 4312.1.1.5 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › RelE | 0.52 | 37.0 | 4.06e-01 | 86.4% | 93.5% |
| 4947363 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.52 | 36.0 | 3.30e-01 | 100.0% | 52.6% |
| 4996769 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 39.0 | 4.15e-01 | 79.3% | 91.7% |
| 3518369 | 11.1.4.92 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › VPS13_VAB | 0.51 | 33.0 | 3.72e-01 | 85.0% | 87.6% |