Back to structures

ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00216

Bact-Vir

ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00216

Identity

Kingdom:
phage

Quality

90.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-96
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.56 42.0 3.55e-01 81.9% 89.6%
4iluA02 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.51 43.0 3.84e-01 98.6% 78.4%
3zgzA04 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.50 37.0 2.92e-01 81.9% 70.1%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3725302 101.1.2.381 alpha arrays › HTH › HTH › winged helix domain › UBR1-like_wing 0.59 45.0 3.97e-01 84.7% 84.5%
3413715 109.4.1.182 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS,DCB 0.55 47.0 2.91e-01 100.0% 37.2%
3213782 101.1.1.102 alpha arrays › HTH › HTH › Three-helical HTH › Lin-8 0.52 42.0 3.41e-01 90.3% 86.9%
3937817 2006.1.2.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › CDC45 0.51 44.0 3.00e-01 98.6% 82.1%