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ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00266
Bact-VirALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00266
Identity
- Kingdom:
- phage
Quality
80.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-106_255-283
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00377__D52-163
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01471.24 best | PG_binding_1 | 32.0 | 1.60e-07 | 43.5% | 70.2% |
D2
high
residues 110-235
Domain cluster:
rep: LC597490.1__BCO16146.1__X__00093__D304-401
D3
high
residues 297-446
Domain cluster:
rep: IMGVR_UViG_3300010365_000948-3300010365-Ga0116251_100243398__D64-195
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01832.26 best | Glucosaminidase | 41.8 | 2.40e-10 | 78.7% | 88.6% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.66 | 35.0 | 4.58e-01 | 96.7% | 96.2% |
| 5hmlA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.62 | 34.0 | 4.49e-01 | 95.3% | 100.0% |
| 1r6bX03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 37.0 | 4.58e-01 | 84.0% | 98.9% |
| 1fkaG00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.52 | 38.0 | 4.06e-01 | 87.3% | 88.3% |
| 3psfA02 | 1.10.10.650 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RuvA domain 2-like | 0.51 | 32.0 | 3.30e-01 | 96.7% | 63.9% |
| 4akgA11 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.51 | 43.0 | 3.50e-01 | 90.7% | 71.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989161 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.77 | 69.0 | 6.57e-01 | 98.7% | 82.9% |
| 1693577 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.75 | 70.0 | 6.00e-01 | 98.7% | 68.4% |
| 3388213 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.73 | 63.0 | 5.56e-01 | 90.7% | 96.2% |
| 3738475 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.69 | 40.0 | 4.00e-01 | 75.3% | 55.3% |
| 3508049 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.65 | 55.0 | 5.48e-01 | 90.7% | 95.5% |
| 5023792 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.57 | 40.0 | 4.64e-01 | 72.0% | 100.0% |
| 4983838 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.54 | 33.0 | 3.90e-01 | 98.7% | 91.0% |
| 2605083 | 3432.1.1.1 ↗ | alpha bundles › Minor nucleoprotein VP30 C-terminal domain › Minor nucleoprotein VP30 C-terminal domain › Minor nucleoprotein VP30 C-terminal domain › Transcript_VP30 | 0.51 | 27.0 | 2.89e-01 | 98.7% | 55.0% |
| 3172088 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.50 | 45.0 | 4.48e-01 | 99.3% | 96.1% |