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ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00313

Bact-Vir

ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00313

Identity

Kingdom:
phage

Quality

50.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-70
PDB
D2 high residues 259-329
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dmbA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 54.0 4.32e-01 100.0% 77.4%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 53.0 4.58e-01 100.0% 84.1%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 36.0 4.00e-01 81.7% 89.6%
3szeA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 48.0 3.26e-01 98.6% 33.1%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 35.0 3.63e-01 76.1% 68.8%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 34.0 2.87e-01 100.0% 33.6%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.55 36.0 3.89e-01 76.1% 81.7%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 33.0 3.59e-01 76.1% 80.4%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.52 33.0 3.64e-01 77.5% 86.5%
2l1sA00 3.10.450.160 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr 0.52 42.0 4.00e-01 100.0% 74.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.51 33.0 3.62e-01 77.5% 87.0%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4987744 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.59 40.0 3.31e-01 78.9% 37.0%
3554026 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.59 37.0 3.94e-01 100.0% 75.0%
3290160 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.58 40.0 3.87e-01 77.5% 63.7%
3414063 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.56 37.0 4.06e-01 77.5% 89.1%
3662319 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.55 39.0 3.80e-01 100.0% 66.3%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 39.0 3.91e-01 77.5% 76.0%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.54 38.0 3.71e-01 76.1% 88.7%
3845425 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.53 34.0 3.20e-01 78.9% 51.1%
3841414 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.53 36.0 3.71e-01 76.1% 72.9%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.53 38.0 3.46e-01 76.1% 74.7%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.52 37.0 3.88e-01 77.5% 83.1%
3689576 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.00e-01 77.5% 49.7%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 35.0 3.54e-01 80.3% 70.0%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.51 37.0 3.52e-01 76.1% 72.9%
3244430 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.51 34.0 3.09e-01 80.3% 46.7%
3457106 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.51 36.0 3.76e-01 77.5% 83.1%
3399912 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.51 34.0 3.51e-01 78.9% 72.9%
3436557 220.4.1.8 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins › ZGRF1-like_N 0.50 42.0 4.16e-01 94.4% 92.0%
4283343 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.50 36.0 3.50e-01 77.5% 76.2%
3816455 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.50 36.0 3.03e-01 76.1% 56.8%
3495480 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.50 36.0 3.83e-01 77.5% 90.0%
D3 medium residues 142-237
PDB