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ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00314
Bact-VirALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00314
Identity
- Kingdom:
- phage
Quality
59.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 69-162
Domain cluster:
rep: KC821617.1__AGO48338.1__Phi17-1_gp62__00062__D61-144
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 47.0 | 4.11e-01 | 100.0% | 88.0% |
| 1odhA01 | 2.20.25.670 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain | 0.51 | 27.0 | 3.05e-01 | 100.0% | 64.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3601320 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 32.0 | 3.17e-01 | 100.0% | 49.0% |
| 3224488 | 390.1.1.7 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_3 | 0.50 | 36.0 | 3.33e-01 | 77.7% | 99.2% |
D2
medium
residues 178-237