←Back to structures
ALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00020
Bact-VirALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00020
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-117
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.70 | 55.0 | 4.88e-01 | 84.8% | 96.5% |
| 4e6hA00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 49.0 | 2.98e-01 | 98.7% | 12.1% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.63 | 51.0 | 4.93e-01 | 100.0% | 78.7% |
| 3k1zA02 | 1.10.150.720 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Haloacid dehalogenase-like hydrolase | 0.60 | 43.0 | 4.31e-01 | 82.3% | 72.6% |
| 1ldjA02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.59 | 46.0 | 4.02e-01 | 84.8% | 95.9% |
| 2k7bA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 36.0 | 3.65e-01 | 83.5% | 67.1% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.55 | 41.0 | 4.04e-01 | 86.1% | 74.7% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.54 | 40.0 | 3.72e-01 | 84.8% | 61.0% |
| 3zheD01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 47.0 | 3.56e-01 | 98.7% | 61.5% |
| 5fglA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 46.0 | 3.57e-01 | 100.0% | 63.5% |
| 2g29A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 46.0 | 3.32e-01 | 100.0% | 87.5% |
| 2qw6D00 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.54 | 36.0 | 3.60e-01 | 82.3% | 65.1% |
| 3beeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 41.0 | 3.93e-01 | 88.6% | 72.5% |
| 6hftA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 44.0 | 3.81e-01 | 92.4% | 72.4% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.52 | 40.0 | 4.16e-01 | 91.1% | 90.7% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.52 | 41.0 | 3.93e-01 | 87.3% | 88.2% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 44.0 | 4.15e-01 | 97.5% | 82.5% |
| 2a0bA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.51 | 40.0 | 3.59e-01 | 87.3% | 66.9% |
| 2wwxB00 | 1.20.1260.70 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.50 | 42.0 | 3.28e-01 | 98.7% | 53.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3714124 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.62 | 55.0 | 4.52e-01 | 100.0% | 57.9% |
| 3958909 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.61 | 51.0 | 3.90e-01 | 100.0% | 89.8% |
| 5056846 | 1075.1.2.44 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › PF27404 | 0.60 | 51.0 | 4.46e-01 | 100.0% | 97.7% |
| 3196983 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.59 | 45.0 | 3.29e-01 | 84.8% | 28.6% |
| 3429481 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.59 | 44.0 | 3.42e-01 | 97.5% | 35.0% |
| 4212709 | 109.4.1.191 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7 | 0.57 | 43.0 | 3.54e-01 | 92.4% | 42.7% |
| 3598088 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 50.0 | 4.25e-01 | 100.0% | 60.0% |
| 3335062 | 101.1.10.36 ↗ | alpha arrays › HTH › HTH › Cyclin-like › MOM1 | 0.55 | 46.0 | 4.05e-01 | 97.5% | 60.8% |
| 3721800 | 109.40.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Hira | 0.55 | 46.0 | 4.00e-01 | 94.9% | 71.5% |
| 3257258 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 43.0 | 4.12e-01 | 92.4% | 72.6% |
| 3812634 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 46.0 | 4.32e-01 | 100.0% | 85.0% |
| 2875705 | 109.4.1.1306 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_11 | 0.53 | 38.0 | 3.69e-01 | 93.7% | 65.2% |