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ALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00061

Bact-Vir

ALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00061

Identity

Kingdom:
phage

Quality

54.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 125-203
PDB
Domain cluster: rep: MN695334.1__QGT54366.1__b3_0122__00108__D2-67
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 49.0 5.24e-01 100.0% 92.4%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.60 42.0 3.77e-01 100.0% 53.2%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 44.0 4.50e-01 100.0% 81.6%
2m38A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 47.0 4.07e-01 93.7% 92.6%
2ktsA01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.54 42.0 3.91e-01 84.8% 100.0%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.79e-01 93.7% 75.4%
1g3pA01 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.52 31.0 3.03e-01 84.8% 48.9%
3q1nA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 42.0 2.87e-01 91.1% 39.8%
6lf2B01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 40.0 3.55e-01 88.6% 98.4%
6i18A04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 37.0 3.42e-01 78.5% 100.0%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3991459 220.1.1.60 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ECT2_PH 0.62 52.0 3.85e-01 93.7% 68.6%
3305101 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 48.0 3.94e-01 93.7% 78.7%
4961931 2.4.1.7 ↗ beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK 0.57 44.0 3.69e-01 84.8% 50.0%
3705308 9.1.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.52 43.0 3.86e-01 92.4% 99.1%
4928853 9.1.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.52 43.0 3.79e-01 89.9% 99.1%
None — 0.51 43.0 3.01e-01 100.0% 71.9%
3829372 6.1.1.19 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › RicinB_lectin_2 0.50 38.0 3.17e-01 83.5% 99.3%
4561925 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.50 44.0 4.02e-01 100.0% 94.5%
D2 medium residues 1-82
PDB