←Back to structures
ALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00075
Bact-VirALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00075
Identity
- Kingdom:
- phage
Quality
79.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-110
Domain cluster:
rep: MN094788.1__QDH83546.1__X__00156__D2-100
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.65 | 33.0 | 4.36e-01 | 74.5% | 91.1% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.60 | 33.0 | 3.58e-01 | 75.5% | 63.1% |
| 1tk1A00 | 3.40.1500.10 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic | 0.58 | 50.0 | 4.00e-01 | 98.0% | 90.9% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.58 | 31.0 | 3.92e-01 | 74.5% | 89.8% |
| 3ci0I00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.57 | 33.0 | 3.61e-01 | 75.5% | 68.7% |
| 4o4oA00 | 2.40.128.590 | Mainly Beta › Beta Barrel › Lipocalin › CpcT/CpeT domain | 0.57 | 46.0 | 3.69e-01 | 86.3% | 45.7% |
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.56 | 48.0 | 4.17e-01 | 91.2% | 92.0% |
| 1y4wA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 45.0 | 3.12e-01 | 89.2% | 91.5% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 38.0 | 3.21e-01 | 70.6% | 79.9% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 37.0 | 3.65e-01 | 72.5% | 64.2% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.54 | 27.0 | 3.39e-01 | 72.5% | 82.5% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 36.0 | 3.74e-01 | 78.4% | 73.5% |
| 1uypA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 43.0 | 3.13e-01 | 87.3% | 96.8% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.52 | 42.0 | 3.79e-01 | 87.3% | 91.7% |
| 5bw0F00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.52 | 31.0 | 3.30e-01 | 76.5% | 65.9% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 40.0 | 2.81e-01 | 84.3% | 90.2% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 38.0 | 3.46e-01 | 95.1% | 57.2% |
| 2mhgA00 | 2.20.130.30 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 | 0.51 | 35.0 | 3.98e-01 | 78.4% | 97.3% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.51 | 36.0 | 3.82e-01 | 88.2% | 85.4% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 38.0 | 3.07e-01 | 80.4% | 88.9% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.50 | 41.0 | 3.73e-01 | 85.3% | 87.1% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3283095 | 4321.1.1.0 ↗ | a+b two layers › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region | 0.65 | 52.0 | 4.14e-01 | 86.3% | 92.2% |
| 5050503 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.63 | 50.0 | 3.32e-01 | 87.3% | 84.2% |
| 3794870 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.62 | 49.0 | 4.21e-01 | 83.3% | 90.6% |
| 3487868 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.62 | 37.0 | 4.53e-01 | 75.5% | 92.3% |
| 4945303 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.60 | 45.0 | 3.17e-01 | 81.4% | 59.4% |
| 3255634 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 41.0 | 2.71e-01 | 72.5% | 23.8% |
| 3491456 | 3369.1.1.0 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 | 0.56 | 41.0 | 3.58e-01 | 75.5% | 61.3% |
| 5022113 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.56 | 42.0 | 3.74e-01 | 79.4% | 89.0% |
| 5030082 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 41.0 | 3.48e-01 | 79.4% | 91.4% |
| 3173480 | 3755.4.1.28 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Kre28 | 0.55 | 40.0 | 4.28e-01 | 83.3% | 87.8% |
| 5052205 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.55 | 42.0 | 2.55e-01 | 80.4% | 88.3% |
| 3995103 | 206.1.1.44 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF1679 | 0.55 | 43.0 | 2.99e-01 | 86.3% | 91.6% |
| 3359496 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.55 | 39.0 | 2.82e-01 | 73.5% | 36.4% |
| 5049570 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.54 | 32.0 | 2.52e-01 | 75.5% | 25.7% |
| 3368126 | 5.1.5.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 | 0.54 | 37.0 | 2.75e-01 | 70.6% | 35.9% |
| 3328470 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.54 | 44.0 | 4.09e-01 | 89.2% | 93.1% |
| 3368132 | 4099.1.1.4 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O | 0.54 | 44.0 | 4.18e-01 | 89.2% | 98.3% |
| 3266323 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.53 | 42.0 | 4.05e-01 | 86.3% | 99.2% |
| 3601539 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.53 | 38.0 | 2.97e-01 | 76.5% | 100.0% |
| 3217918 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.53 | 39.0 | 2.70e-01 | 78.4% | 67.3% |
| 2045451 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.52 | 38.0 | 2.64e-01 | 76.5% | 74.7% |
| 5050662 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.52 | 39.0 | 3.42e-01 | 81.4% | 85.3% |
| 4947911 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.52 | 36.0 | 3.16e-01 | 71.6% | 89.5% |
| 5047088 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.51 | 36.0 | 2.75e-01 | 71.6% | 39.1% |
| 3960733 | 330.8.1.1 ↗ | a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like | 0.51 | 35.0 | 3.72e-01 | 93.1% | 83.5% |
| 3254674 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.51 | 38.0 | 2.58e-01 | 77.5% | 49.5% |
| 4022543 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.51 | 36.0 | 2.77e-01 | 73.5% | 62.1% |
| 3709343 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.51 | 34.0 | 3.16e-01 | 77.5% | 51.1% |
| 5032125 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 34.0 | 2.52e-01 | 71.6% | 27.3% |
| 4013354 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.51 | 35.0 | 2.52e-01 | 71.6% | 95.2% |
| 3907221 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.51 | 38.0 | 3.06e-01 | 80.4% | 90.0% |
| 3479226 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.50 | 39.0 | 4.00e-01 | 85.3% | 100.0% |
| 4638438 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.50 | 35.0 | 3.01e-01 | 72.5% | 90.0% |