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ALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00143

Bact-Vir

ALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00143

Identity

Kingdom:
phage

Quality

65.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-92
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5iipA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.76 48.0 3.69e-01 100.0% 30.2%
3lv9A00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.75 49.0 3.62e-01 100.0% 27.7%
2p9mB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.75 48.0 3.54e-01 100.0% 27.1%
8gpsA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.75 49.0 3.83e-01 100.0% 33.6%
3lhhA01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.75 48.0 3.85e-01 100.0% 34.3%
2ouxA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.75 48.0 3.59e-01 100.0% 27.9%
1vr9A01 3.90.1280.20 Alpha Beta › Alpha-Beta Complex › CBS domain Like › 0.75 48.0 4.56e-01 100.0% 56.2%
1pvmA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.74 48.0 3.29e-01 100.0% 20.2%
3ddjA01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.74 48.0 3.53e-01 100.0% 26.5%
3ocoA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.74 48.0 3.52e-01 100.0% 26.5%
3orgA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.73 46.0 3.47e-01 100.0% 27.8%
3ocmB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.73 47.0 3.41e-01 100.0% 24.7%
3ctuA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.73 45.0 3.28e-01 100.0% 23.4%
2yziB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.73 46.0 3.39e-01 100.0% 25.9%
3kpbA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.73 47.0 3.60e-01 100.0% 30.3%
4hg0A01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.72 46.0 3.37e-01 100.0% 24.5%
2yzqA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.72 47.0 3.51e-01 100.0% 28.8%
1vr9A02 3.10.20.750 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.72 47.0 4.64e-01 100.0% 64.3%
3sl7A00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.71 46.0 3.37e-01 100.0% 25.5%
3kh5A01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.71 46.0 3.37e-01 100.0% 25.4%
3oi8A01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.71 46.0 3.88e-01 100.0% 39.6%
2nycA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.71 46.0 3.46e-01 100.0% 27.7%
3i8nB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.71 47.0 3.54e-01 100.0% 29.4%
3fhmA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.70 45.0 3.37e-01 100.0% 26.5%
4dqwA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.70 45.0 3.57e-01 100.0% 31.9%
3hf7A00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.70 45.0 3.45e-01 100.0% 28.3%
3jtfA01 3.90.1280.20 Alpha Beta › Alpha-Beta Complex › CBS domain Like › 0.70 44.0 4.28e-01 100.0% 57.4%
3l2bA01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.70 45.0 3.50e-01 100.0% 30.8%
3gbyA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.69 45.0 3.42e-01 100.0% 28.3%
1zfjA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 44.0 2.58e-01 100.0% 7.6%
2uv4A00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.68 44.0 3.27e-01 100.0% 25.2%
3kxrA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.68 47.0 3.53e-01 100.0% 31.0%
1a10I00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.67 40.0 3.79e-01 100.0% 50.8%
7v5yA01 3.40.1620.10 Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › YefM-like domain 0.66 44.0 4.54e-01 100.0% 74.5%
2yzsA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.64 41.0 3.66e-01 100.0% 45.0%
3ddjA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.63 42.0 3.11e-01 100.0% 25.9%
5wq5A01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 44.0 3.35e-01 100.0% 47.2%
1knvB00 3.40.91.10 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.54 38.0 2.40e-01 74.1% 41.9%
2oo4A02 3.30.70.3310 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 42.0 3.36e-01 88.9% 89.2%
2b78A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.52 37.0 3.53e-01 100.0% 63.6%
2ymaA00 3.10.310.60 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.52 45.0 3.42e-01 100.0% 49.6%
4esjA01 3.40.210.30 Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain 0.51 39.0 2.81e-01 100.0% 28.8%
2qvxX02 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 36.0 2.76e-01 100.0% 28.6%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5009980 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.80 51.0 3.80e-01 100.0% 28.8%
3975834 7045.1.1.2 a+b complex topology › C-terminal domain of RNA helicase HrpB › C-terminal domain of RNA helicase HrpB › C-terminal domain of RNA helicase HrpB › DUF3418 0.78 44.0 2.85e-01 100.0% 13.3%
3600890 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.77 50.0 3.31e-01 100.0% 18.5%
5063100 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.77 50.0 3.80e-01 100.0% 31.3%
3264654 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.76 49.0 3.36e-01 100.0% 20.6%
3220699 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.76 49.0 3.49e-01 100.0% 24.0%
4646567 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.76 49.0 3.47e-01 100.0% 24.0%
5019941 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.76 49.0 3.62e-01 100.0% 27.7%
5059208 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.76 49.0 3.39e-01 100.0% 22.0%
3262174 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.75 49.0 3.41e-01 100.0% 22.5%
4931904 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.75 49.0 3.50e-01 100.0% 24.8%
3253883 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.75 49.0 3.37e-01 100.0% 21.8%
3602310 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.75 49.0 3.60e-01 100.0% 27.7%
3220698 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.75 48.0 3.43e-01 100.0% 23.2%
4414009 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.75 49.0 3.65e-01 100.0% 28.8%
4999821 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.75 48.0 3.53e-01 100.0% 26.7%
5004756 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.75 48.0 3.60e-01 100.0% 27.7%
4951217 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.75 46.0 3.51e-01 100.0% 27.2%
5058768 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.53e-01 100.0% 26.7%
4994049 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.56e-01 100.0% 27.7%
7290 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.56e-01 100.0% 27.3%
5010419 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.58e-01 100.0% 27.7%
3597764 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.32e-01 100.0% 21.2%
5077361 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.48e-01 100.0% 25.2%
3032600 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.59e-01 100.0% 28.3%
3651195 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 4.29e-01 100.0% 48.0%
5041682 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 4.08e-01 100.0% 42.4%
4948577 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.28e-01 100.0% 20.1%
4936564 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 47.0 3.32e-01 100.0% 22.6%
5017557 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.57e-01 100.0% 27.7%
3959587 282.1.1.0 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.74 48.0 3.56e-01 100.0% 27.7%
4956660 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.41e-01 100.0% 24.0%
4948539 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.89e-01 100.0% 36.7%
4994484 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 46.0 3.47e-01 100.0% 27.2%
5027502 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.55e-01 100.0% 27.7%
4952601 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.56e-01 100.0% 28.8%
5035916 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.74 48.0 3.44e-01 100.0% 24.8%
3782400 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 48.0 3.53e-01 100.0% 27.7%
3672183 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.35e-01 100.0% 22.5%
4994427 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.53e-01 100.0% 27.7%
5016197 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.71e-01 100.0% 32.7%
5074808 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.37e-01 100.0% 23.4%
4941502 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.45e-01 100.0% 25.7%
4988720 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.34e-01 100.0% 23.2%
3969169 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.21e-01 100.0% 19.5%
4122425 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.40e-01 100.0% 24.8%
5029816 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 48.0 3.60e-01 100.0% 28.5%
5016418 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.34e-01 100.0% 22.8%
4970645 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.51e-01 100.0% 27.7%
3970509 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.41e-01 100.0% 24.8%
5078399 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.43e-01 100.0% 25.7%
3958917 282.1.1.0 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.73 47.0 3.46e-01 100.0% 26.7%
2850205 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.73 47.0 3.59e-01 100.0% 30.0%
5083459 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.72 47.0 3.48e-01 100.0% 26.7%
3684123 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.72 47.0 3.15e-01 100.0% 18.9%
5012110 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.72 47.0 3.50e-01 100.0% 27.7%
5045394 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.72 47.0 3.30e-01 100.0% 22.5%
5027501 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.72 47.0 3.40e-01 100.0% 25.2%
3290334 282.1.1.0 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.72 46.0 3.40e-01 100.0% 25.7%
4999043 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.72 47.0 3.44e-01 100.0% 26.4%
5058056 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.71 46.0 3.54e-01 100.0% 30.0%
1546092 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.71 46.0 3.45e-01 100.0% 27.5%
3742308 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.71 45.0 3.19e-01 100.0% 21.2%
3305300 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.70 45.0 3.07e-01 100.0% 18.2%
1087109 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.70 45.0 4.49e-01 100.0% 64.3%
3263167 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.67 47.0 3.39e-01 100.0% 27.8%
4946713 282.1.1.0 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.62 41.0 2.98e-01 100.0% 23.9%
5077917 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.60 46.0 3.56e-01 100.0% 37.5%
4014350 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.56 45.0 2.79e-01 100.0% 13.9%
3461696 1.1.9.16 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.54 47.0 3.68e-01 100.0% 73.7%
4114973 7582.1.1.2 a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 0.52 47.0 3.29e-01 100.0% 60.9%
3589866 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.51 40.0 3.60e-01 92.6% 97.6%
3272928 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 41.0 2.93e-01 100.0% 29.5%
D2 high residues 111-166
PDB