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ALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00047
Bact-VirALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00047
Identity
- Kingdom:
- phage
Quality
77.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-81
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6psyA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.74 | 57.0 | 3.99e-01 | 83.1% | 39.6% |
| 4g79A00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.72 | 55.0 | 4.44e-01 | 81.7% | 68.7% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 48.0 | 4.76e-01 | 73.2% | 82.7% |
| 4ckmB00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.69 | 53.0 | 4.20e-01 | 83.1% | 65.3% |
| 3gwiA00 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.68 | 51.0 | 3.86e-01 | 80.3% | 56.1% |
| 1qmnA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.67 | 46.0 | 3.64e-01 | 70.4% | 90.7% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 42.0 | 3.29e-01 | 100.0% | 30.9% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.66 | 47.0 | 4.62e-01 | 77.5% | 86.1% |
| 3u97A00 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.64 | 41.0 | 4.04e-01 | 100.0% | 59.7% |
| 3qv0A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.64 | 47.0 | 3.51e-01 | 77.5% | 33.0% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.63 | 46.0 | 3.47e-01 | 78.9% | 31.6% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.63 | 48.0 | 4.69e-01 | 83.1% | 94.9% |
| 1oo0A00 | 3.30.1560.10 | Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi | 0.63 | 50.0 | 3.99e-01 | 87.3% | 62.5% |
| 2xu7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 52.0 | 3.31e-01 | 91.5% | 40.0% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.62 | 50.0 | 3.56e-01 | 91.5% | 78.4% |
| 3flpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 46.0 | 3.31e-01 | 83.1% | 75.1% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 49.0 | 3.16e-01 | 90.1% | 19.7% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 46.0 | 4.08e-01 | 84.5% | 72.9% |
| 4bgjA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 47.0 | 4.08e-01 | 88.7% | 69.5% |
| 1xkiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 40.0 | 3.30e-01 | 70.4% | 41.4% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 45.0 | 3.87e-01 | 87.3% | 69.9% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 44.0 | 4.53e-01 | 83.1% | 98.5% |
| 3cqnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 43.0 | 3.40e-01 | 83.1% | 63.4% |
| 4l1nA00 | 2.40.128.660 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 | 0.57 | 51.0 | 3.89e-01 | 100.0% | 46.6% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 47.0 | 3.15e-01 | 100.0% | 23.8% |
| 3gvzA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.56 | 46.0 | 3.23e-01 | 94.4% | 80.9% |
| 2bvbA00 | 2.60.120.710 | Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 | 0.56 | 47.0 | 3.81e-01 | 93.0% | 82.5% |
| 3cjeA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.55 | 41.0 | 3.27e-01 | 81.7% | 48.0% |
| 1a87A01 | 3.30.1120.60 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin | 0.53 | 43.0 | 3.95e-01 | 91.5% | 84.5% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 43.0 | 3.44e-01 | 91.5% | 56.8% |
| 2l73A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 40.0 | 3.30e-01 | 87.3% | 60.8% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4160544 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.72 | 60.0 | 4.71e-01 | 93.0% | 99.3% |
| 4622176 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.72 | 58.0 | 3.56e-01 | 87.3% | 29.4% |
| 3290321 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.70 | 54.0 | 4.77e-01 | 81.7% | 72.0% |
| 4486741 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 56.0 | 3.55e-01 | 90.1% | 33.2% |
| 4451493 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.68 | 52.0 | 3.93e-01 | 83.1% | 48.8% |
| 3948011 | 3816.1.1.1 ↗ | beta barrels › Polymyxin B resistance protein › Polymyxin B resistance protein › Polymyxin B resistance protein › PmrD | 0.68 | 51.0 | 5.00e-01 | 80.3% | 96.2% |
| 4056826 | 3816.1.1.1 ↗ | beta barrels › Polymyxin B resistance protein › Polymyxin B resistance protein › Polymyxin B resistance protein › PmrD | 0.68 | 51.0 | 4.93e-01 | 80.3% | 96.2% |
| 3252223 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 53.0 | 3.35e-01 | 84.5% | 29.4% |
| 3403847 | 9.1.1.47 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Chitin_bind_4 | 0.67 | 51.0 | 4.73e-01 | 81.7% | 71.1% |
| 3407108 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 55.0 | 3.49e-01 | 90.1% | 32.2% |
| 3595152 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 54.0 | 4.00e-01 | 87.3% | 53.1% |
| 3783250 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.66 | 54.0 | 3.43e-01 | 87.3% | 49.1% |
| 3286878 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.66 | 51.0 | 3.91e-01 | 84.5% | 56.0% |
| 4030001 | 5.1.4.621 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Mcl1_mid | 0.66 | 50.0 | 2.88e-01 | 81.7% | 19.1% |
| 5001388 | 330.10.1.0 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain | 0.66 | 51.0 | 4.17e-01 | 83.1% | 76.9% |
| 3242101 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.65 | 54.0 | 3.18e-01 | 91.5% | 27.5% |
| None | — | 0.65 | 55.0 | 3.39e-01 | 93.0% | 69.1% | |
| 4003669 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.64 | 53.0 | 3.19e-01 | 90.1% | 22.3% |
| 3173290 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.64 | 51.0 | 3.22e-01 | 87.3% | 42.3% |
| 3470076 | 861.1.1.0 ↗ | a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein | 0.64 | 50.0 | 4.04e-01 | 85.9% | 63.6% |
| 3259368 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.64 | 53.0 | 3.26e-01 | 93.0% | 38.7% |
| 3267108 | 5.1.4.224 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 | 0.63 | 52.0 | 3.36e-01 | 91.5% | 68.0% |
| 3738198 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 51.0 | 3.27e-01 | 91.5% | 44.4% |
| 3932950 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 53.0 | 3.34e-01 | 93.0% | 26.7% |
| 3811727 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.63 | 51.0 | 3.49e-01 | 90.1% | 28.8% |
| 4083083 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 51.0 | 3.39e-01 | 91.5% | 35.0% |
| 3591236 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 55.0 | 3.20e-01 | 100.0% | 12.1% |
| 3739384 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.62 | 51.0 | 4.65e-01 | 93.0% | 99.0% |
| 3850746 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.62 | 51.0 | 3.13e-01 | 90.1% | 51.2% |
| 5078475 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.62 | 44.0 | 3.55e-01 | 76.1% | 40.0% |
| 3440368 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 50.0 | 3.26e-01 | 93.0% | 24.2% |
| 3290463 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.62 | 43.0 | 3.57e-01 | 74.6% | 47.4% |
| 3637558 | 5.1.4.348 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_1st | 0.61 | 52.0 | 3.35e-01 | 95.8% | 74.8% |
| 3819740 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.61 | 50.0 | 4.72e-01 | 93.0% | 97.8% |
| 3967202 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.61 | 45.0 | 4.02e-01 | 80.3% | 68.6% |
| 3793797 | 5.1.5.93 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N | 0.60 | 49.0 | 3.23e-01 | 91.5% | 20.3% |
| 3295575 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.59 | 48.0 | 4.37e-01 | 93.0% | 88.0% |
| 3560129 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.59 | 42.0 | 3.55e-01 | 76.1% | 68.8% |
| 3318685 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.59 | 48.0 | 4.29e-01 | 93.0% | 83.8% |
| 3785172 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 51.0 | 3.33e-01 | 100.0% | 21.2% |
| 3889630 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.59 | 49.0 | 3.70e-01 | 93.0% | 44.3% |
| 4827586 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.59 | 44.0 | 3.10e-01 | 80.3% | 36.5% |
| 3735222 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 50.0 | 3.17e-01 | 100.0% | 18.8% |
| 2095479 | 1170.1.2.3 ↗ | beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) › Phage_glycop_gL | 0.58 | 51.0 | 4.47e-01 | 100.0% | 88.9% |
| 3455310 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 45.0 | 3.02e-01 | 88.7% | 29.7% |
| 3502799 | 5.1.4.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 | 0.58 | 47.0 | 2.88e-01 | 94.4% | 21.7% |
| 3645097 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.57 | 46.0 | 3.01e-01 | 88.7% | 40.6% |
| 4929818 | 861.1.1.0 ↗ | a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein | 0.57 | 45.0 | 3.71e-01 | 88.7% | 93.3% |
| 3215377 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.56 | 45.0 | 2.94e-01 | 91.5% | 31.2% |
| 134473 | 210.1.2.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT | 0.56 | 46.0 | 3.23e-01 | 94.4% | 80.9% |
| 3414586 | 11.1.1.824 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chitin_bind_4 | 0.56 | 47.0 | 4.28e-01 | 91.5% | 74.2% |
| 4260297 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.55 | 49.0 | 3.26e-01 | 100.0% | 99.3% |
| 3001014 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.55 | 45.0 | 3.56e-01 | 93.0% | 81.8% |
| 3418904 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.54 | 41.0 | 3.75e-01 | 85.9% | 81.0% |
| 3427945 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.53 | 41.0 | 3.74e-01 | 85.9% | 80.0% |
| 3293481 | 861.1.1.1 ↗ | a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein › Mago_nashi | 0.51 | 40.0 | 3.48e-01 | 91.5% | 72.0% |