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ALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00054
Bact-VirALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00054
Identity
- Kingdom:
- phage
Quality
70.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-79
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.61 | 43.0 | 3.50e-01 | 75.7% | 77.5% |
| 2du7B03 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.60 | 44.0 | 2.96e-01 | 79.7% | 94.1% |
| 3l2oB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 44.0 | 3.38e-01 | 85.1% | 62.9% |
| 6vt2A03 | 2.60.40.4140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 38.0 | 3.27e-01 | 71.6% | 63.3% |
| 4ffgA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 45.0 | 3.03e-01 | 94.6% | 69.6% |
| 3g0kA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.28e-01 | 75.7% | 63.3% |
| 3gb0A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 44.0 | 3.17e-01 | 100.0% | 80.5% |
| 4fnvA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 38.0 | 2.64e-01 | 77.0% | 69.5% |
| 4f0qA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 43.0 | 3.34e-01 | 100.0% | 51.6% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 42.0 | 3.96e-01 | 97.3% | 79.8% |
| 2f9aA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 37.0 | 2.44e-01 | 81.1% | 74.5% |
| 2gk4A00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.50 | 41.0 | 3.07e-01 | 98.6% | 97.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3557904 | 101.1.2.580 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEPDC5_CTD | 0.69 | 50.0 | 4.44e-01 | 75.7% | 54.8% |
| 5068446 | 832.1.1.0 ↗ | a+b three layers › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 0.64 | 37.0 | 3.12e-01 | 82.4% | 33.6% |
| 3446806 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.60 | 48.0 | 4.65e-01 | 100.0% | 76.2% |
| 3502941 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 44.0 | 4.46e-01 | 82.4% | 88.0% |
| 3496362 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.56 | 42.0 | 3.24e-01 | 79.7% | 63.5% |
| 3234609 | 192.6.1.10 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › WHEP-TRS | 0.54 | 33.0 | 3.76e-01 | 82.4% | 88.0% |
| 3253867 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.53 | 39.0 | 3.33e-01 | 82.4% | 64.4% |
| 3991016 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 30.0 | 3.08e-01 | 82.4% | 52.0% |
| 3695788 | 109.54.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › PF28770 | 0.52 | 46.0 | 3.02e-01 | 100.0% | 31.7% |
| 3637467 | 101.1.2.74 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cnd2 | 0.52 | 37.0 | 3.41e-01 | 77.0% | 85.4% |
| 3481273 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 44.0 | 3.97e-01 | 98.6% | 78.1% |
| 4017239 | 708.1.1.8 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FAR1 | 0.51 | 38.0 | 3.51e-01 | 82.4% | 89.9% |