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ALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00166
Bact-VirALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00166
Identity
- Kingdom:
- phage
Quality
78.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-76
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.72 | 56.0 | 4.74e-01 | 100.0% | 50.5% |
| 2budA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 56.0 | 5.01e-01 | 98.4% | 59.8% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 59.0 | 5.71e-01 | 100.0% | 81.9% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 59.0 | 5.75e-01 | 98.4% | 84.7% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.64 | 47.0 | 3.79e-01 | 79.7% | 70.5% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 48.0 | 5.14e-01 | 81.2% | 94.5% |
| 6rupA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 51.0 | 4.30e-01 | 89.1% | 94.6% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 51.0 | 4.29e-01 | 89.1% | 80.4% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 48.0 | 4.91e-01 | 95.3% | 88.7% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.62 | 52.0 | 4.74e-01 | 100.0% | 68.8% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 47.0 | 3.77e-01 | 81.2% | 74.0% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 54.0 | 5.29e-01 | 96.9% | 92.6% |
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 50.0 | 3.51e-01 | 90.6% | 42.4% |
| 2e5wA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.61 | 42.0 | 4.46e-01 | 90.6% | 85.7% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.60 | 44.0 | 4.65e-01 | 90.6% | 91.1% |
| 6nu7A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 50.0 | 3.18e-01 | 93.8% | 26.2% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 46.0 | 4.39e-01 | 85.9% | 100.0% |
| 2l4vA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 49.0 | 3.90e-01 | 92.2% | 54.1% |
| 1h4iA00 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.60 | 50.0 | 2.90e-01 | 93.8% | 16.6% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 51.0 | 4.34e-01 | 98.4% | 62.4% |
| 3mg1B02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 48.0 | 3.95e-01 | 92.2% | 88.0% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 46.0 | 4.66e-01 | 95.3% | 88.9% |
| 4bg7A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.57 | 41.0 | 3.63e-01 | 84.4% | 50.0% |
| 3exzB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 47.0 | 3.56e-01 | 89.1% | 89.8% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 43.0 | 3.82e-01 | 87.5% | 94.1% |
| 4gn2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 40.0 | 2.80e-01 | 79.7% | 95.0% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 45.0 | 2.95e-01 | 87.5% | 43.1% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.55 | 34.0 | 4.01e-01 | 73.4% | 89.1% |
| 8jx6A02 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 46.0 | 4.06e-01 | 100.0% | 99.0% |
| 7qi3A01 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.54 | 41.0 | 2.68e-01 | 84.4% | 32.5% |
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 44.0 | 3.74e-01 | 98.4% | 63.2% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 45.0 | 3.37e-01 | 100.0% | 57.2% |
| 2ckfB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 3.20e-01 | 92.2% | 80.6% |
| 1ae2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 43.0 | 3.99e-01 | 95.3% | 100.0% |
| 2vijA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 43.0 | 3.50e-01 | 98.4% | 49.6% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 44.0 | 2.81e-01 | 100.0% | 92.3% |
| 3vr0A00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.50 | 40.0 | 2.73e-01 | 87.5% | 34.4% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 36.0 | 3.72e-01 | 78.1% | 82.5% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 41.0 | 3.31e-01 | 93.8% | 87.1% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5043533 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 66.0 | 6.68e-01 | 100.0% | 89.1% |
| 3519308 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 62.0 | 6.38e-01 | 98.4% | 98.3% |
| 3410370 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 62.0 | 6.01e-01 | 100.0% | 85.7% |
| 3832288 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.71 | 64.0 | 5.71e-01 | 100.0% | 81.1% |
| 3550699 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.71 | 62.0 | 5.42e-01 | 100.0% | 65.3% |
| 3730835 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.71 | 58.0 | 5.06e-01 | 100.0% | 60.0% |
| 3886492 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.71 | 60.0 | 5.71e-01 | 100.0% | 78.7% |
| 4020096 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.70 | 62.0 | 4.83e-01 | 100.0% | 52.9% |
| 3999482 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.70 | 64.0 | 5.26e-01 | 100.0% | 80.0% |
| 3340613 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 47.0 | 4.39e-01 | 71.9% | 56.2% |
| 4932581 | 2.1.1.12 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e | 0.69 | 49.0 | 4.91e-01 | 85.9% | 73.8% |
| 3931053 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.69 | 63.0 | 5.35e-01 | 100.0% | 92.0% |
| 3709896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 62.0 | 5.63e-01 | 100.0% | 80.0% |
| 3706903 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.68 | 51.0 | 3.82e-01 | 79.7% | 56.9% |
| 5055505 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 59.0 | 5.42e-01 | 100.0% | 76.5% |
| 3610968 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 52.0 | 4.44e-01 | 81.2% | 100.0% |
| 3938484 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 60.0 | 4.80e-01 | 100.0% | 51.7% |
| 3497521 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.67 | 54.0 | 4.28e-01 | 87.5% | 70.0% |
| 3485387 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 60.0 | 5.69e-01 | 98.4% | 88.0% |
| 3490245 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 59.0 | 5.29e-01 | 100.0% | 77.8% |
| 3707121 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 55.0 | 5.24e-01 | 93.8% | 86.7% |
| 3259989 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 57.0 | 4.44e-01 | 96.9% | 63.7% |
| 3705888 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 53.0 | 4.37e-01 | 89.1% | 78.3% |
| 3741279 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.65 | 49.0 | 3.82e-01 | 81.2% | 70.0% |
| 4853066 | 2.1.1.22 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN | 0.64 | 49.0 | 4.17e-01 | 89.1% | 48.7% |
| 4056532 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.64 | 55.0 | 4.68e-01 | 100.0% | 78.2% |
| 4656484 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.63 | 51.0 | 3.85e-01 | 87.5% | 41.3% |
| 5079927 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 53.0 | 4.76e-01 | 96.9% | 68.9% |
| 3722822 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 2.88e-01 | 87.5% | 24.8% |
| 3782925 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 50.0 | 4.48e-01 | 96.9% | 71.6% |
| 3743261 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 46.0 | 3.79e-01 | 85.9% | 45.8% |
| 3587975 | 2.12.1.1 ↗ | beta barrels › OB-fold › BC4932-like › BC4932-like › DUF1093 | 0.59 | 44.0 | 3.68e-01 | 82.8% | 45.0% |
| 3197575 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.58 | 49.0 | 4.32e-01 | 90.6% | 67.8% |
| 4992338 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.58 | 43.0 | 3.76e-01 | 82.8% | 79.0% |
| 5073196 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.58 | 43.0 | 3.58e-01 | 82.8% | 70.7% |
| 376 | 2.1.1.20 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Phage_DNA_bind | 0.57 | 44.0 | 4.02e-01 | 84.4% | 98.9% |
| 5032255 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 4.50e-01 | 95.3% | 81.4% |
| 3266685 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.57 | 44.0 | 2.45e-01 | 90.6% | 15.7% |
| 3473974 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.57 | 42.0 | 3.26e-01 | 79.7% | 85.5% |
| 3615163 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 50.0 | 4.16e-01 | 96.9% | 57.9% |
| 4982501 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 49.0 | 4.36e-01 | 100.0% | 68.4% |
| 5031909 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.56 | 41.0 | 3.51e-01 | 82.8% | 72.9% |
| 5032212 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.56 | 44.0 | 3.52e-01 | 87.5% | 66.9% |
| 3982704 | 2484.1.1.115 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS66 | 0.56 | 43.0 | 3.36e-01 | 84.4% | 67.1% |
| 4975879 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 43.0 | 3.70e-01 | 89.1% | 81.8% |
| 5030771 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.55 | 40.0 | 3.49e-01 | 82.8% | 73.9% |
| 3563416 | 5095.1.1.0 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen | 0.55 | 43.0 | 4.37e-01 | 89.1% | 96.9% |
| 3988067 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 43.0 | 3.93e-01 | 84.4% | 75.3% |
| 3393084 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 46.0 | 4.28e-01 | 100.0% | 73.8% |
| 3256145 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.55 | 48.0 | 3.54e-01 | 100.0% | 69.7% |
| 3297629 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.55 | 39.0 | 3.68e-01 | 76.6% | 98.8% |
| 4877991 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.54 | 45.0 | 4.00e-01 | 100.0% | 74.0% |
| 3262463 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.54 | 42.0 | 3.42e-01 | 90.6% | 64.3% |
| 4958552 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 42.0 | 3.57e-01 | 87.5% | 75.7% |
| 3995219 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 38.0 | 2.95e-01 | 75.0% | 65.3% |
| 5074611 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.54 | 40.0 | 3.78e-01 | 81.2% | 71.2% |
| 4982277 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 40.0 | 4.04e-01 | 81.2% | 83.1% |
| 5041942 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.53 | 41.0 | 3.55e-01 | 90.6% | 78.3% |
| 4050042 | 4.1.1.441 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26332 | 0.52 | 45.0 | 4.22e-01 | 100.0% | 90.0% |
| 5042375 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.52 | 38.0 | 3.66e-01 | 79.7% | 100.0% |
| 5056723 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 44.0 | 3.95e-01 | 100.0% | 67.4% |
| 3443030 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 44.0 | 4.11e-01 | 98.4% | 87.5% |
| 4020798 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.51 | 40.0 | 2.75e-01 | 89.1% | 69.8% |
| 3486847 | 4.1.1.284 ↗ | beta barrels › SH3 › SH3 › SH3 › SBNO | 0.51 | 43.0 | 3.76e-01 | 100.0% | 67.6% |