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ALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00173
Bact-VirALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00173
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-122
Domain cluster:
rep: CAKLQF020000034.1__CAH1095557.1__SAMEA5780031_03924__00013__D2-80
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7szeB02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.76 | 60.0 | 4.94e-01 | 83.2% | 75.0% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.76 | 54.0 | 4.84e-01 | 72.9% | 64.8% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.73 | 56.0 | 4.96e-01 | 81.3% | 88.2% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.72 | 59.0 | 5.24e-01 | 86.0% | 94.6% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.71 | 51.0 | 5.77e-01 | 84.1% | 100.0% |
| 2nn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.70 | 56.0 | 4.80e-01 | 86.0% | 70.2% |
| 2zfdB00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.70 | 55.0 | 5.35e-01 | 84.1% | 76.7% |
| 3rt0C00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.70 | 56.0 | 4.80e-01 | 86.0% | 83.1% |
| 3maeA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.70 | 61.0 | 4.69e-01 | 94.4% | 88.0% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.70 | 60.0 | 5.19e-01 | 92.5% | 73.9% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.69 | 56.0 | 5.13e-01 | 86.9% | 75.0% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.69 | 54.0 | 4.26e-01 | 83.2% | 68.7% |
| 1eq6A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.68 | 51.0 | 4.20e-01 | 78.5% | 68.8% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 47.0 | 5.06e-01 | 86.9% | 84.4% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.68 | 50.0 | 4.97e-01 | 86.0% | 73.2% |
| 3p9vA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.68 | 54.0 | 4.73e-01 | 85.0% | 89.9% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.68 | 52.0 | 5.08e-01 | 84.1% | 75.7% |
| 4zxwB01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.68 | 55.0 | 4.70e-01 | 87.9% | 78.5% |
| 1dpbA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.67 | 60.0 | 4.58e-01 | 98.1% | 86.8% |
| 5e4bA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.67 | 54.0 | 4.60e-01 | 87.9% | 86.9% |
| 5t3dA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.66 | 55.0 | 4.64e-01 | 88.8% | 77.7% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 52.0 | 5.22e-01 | 83.2% | 86.1% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 53.0 | 5.15e-01 | 85.0% | 81.0% |
| 7r9xA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.65 | 54.0 | 4.67e-01 | 88.8% | 84.0% |
| 1tw0A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 52.0 | 4.60e-01 | 86.0% | 93.0% |
| 3klxB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 59.0 | 4.92e-01 | 99.1% | 82.9% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 52.0 | 4.57e-01 | 86.0% | 91.1% |
| 8cwoF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.64 | 48.0 | 5.15e-01 | 85.0% | 92.2% |
| 6n8eA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.63 | 52.0 | 4.46e-01 | 88.8% | 76.2% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 55.0 | 5.00e-01 | 95.3% | 93.0% |
| 2vgaA00 | 2.60.240.10 | Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein | 0.63 | 44.0 | 3.61e-01 | 72.9% | 90.7% |
| 6mfxA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.63 | 51.0 | 4.53e-01 | 89.7% | 79.4% |
| 4meeA00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.63 | 44.0 | 3.15e-01 | 72.0% | 89.8% |
| 6oodA01 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.63 | 43.0 | 3.93e-01 | 72.0% | 100.0% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.61 | 46.0 | 3.75e-01 | 78.5% | 78.4% |
| 2omdA00 | 3.90.1170.40 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit | 0.59 | 55.0 | 5.05e-01 | 100.0% | 92.6% |
| 1cqmA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 43.0 | 4.49e-01 | 86.0% | 83.7% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.58 | 45.0 | 3.25e-01 | 81.3% | 66.9% |
| 4f3lA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 41.0 | 3.94e-01 | 72.0% | 92.6% |
| 4ba0A01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.58 | 43.0 | 3.48e-01 | 77.6% | 99.0% |
| 2wp4B00 | 3.90.1170.40 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit | 0.58 | 54.0 | 4.98e-01 | 100.0% | 92.4% |
| 2q5wE00 | 3.90.1170.40 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit | 0.58 | 53.0 | 4.85e-01 | 100.0% | 86.9% |
| 1sqeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 40.0 | 4.15e-01 | 85.0% | 76.2% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 39.0 | 3.43e-01 | 74.8% | 46.0% |
| 6eheA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.57 | 42.0 | 3.07e-01 | 76.6% | 65.2% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 39.0 | 3.45e-01 | 71.0% | 72.0% |
| 2uuvB01 | 3.40.462.40 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidase, cap domain/gating helix | 0.55 | 48.0 | 3.69e-01 | 100.0% | 74.5% |
| 1w96C04 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 49.0 | 3.71e-01 | 99.1% | 59.0% |
| 3pxpA02 | 3.30.450.180 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 41.0 | 3.43e-01 | 81.3% | 87.4% |
| 3eqvA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 38.0 | 3.59e-01 | 72.9% | 89.5% |
| 8ab6B02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 44.0 | 3.65e-01 | 86.9% | 84.9% |
| 3lidA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 37.0 | 3.84e-01 | 70.1% | 87.5% |
| 2w3xB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 37.0 | 3.40e-01 | 72.9% | 79.9% |
| 3sb1A01 | 3.30.1370.140 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › HupH hydrogenase expression protein, C-terminal domain | 0.53 | 35.0 | 3.64e-01 | 74.8% | 73.7% |
| 2o62A01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 42.0 | 3.97e-01 | 86.9% | 98.5% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 39.0 | 3.46e-01 | 77.6% | 80.4% |
| 2ykfA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 41.0 | 3.69e-01 | 85.0% | 77.4% |
| 5dzeA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 37.0 | 3.02e-01 | 74.8% | 99.0% |
| 2essA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 37.0 | 3.37e-01 | 75.7% | 90.2% |
| 3gekA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 37.0 | 3.45e-01 | 75.7% | 63.4% |
| 2x9aA00 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.50 | 28.0 | 3.50e-01 | 75.7% | 95.1% |
| 4k02A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 34.0 | 3.25e-01 | 70.1% | 92.9% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997740 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.82 | 72.0 | 6.53e-01 | 93.5% | 86.4% |
| 4963976 | 331.6.1.1 ↗ | a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain › DUF1952 | 0.80 | 57.0 | 6.60e-01 | 84.1% | 98.8% |
| 4995617 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.79 | 60.0 | 6.48e-01 | 84.1% | 94.4% |
| 4964630 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.79 | 63.0 | 5.65e-01 | 83.2% | 88.8% |
| 5004871 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.76 | 59.0 | 6.40e-01 | 84.1% | 96.7% |
| 3808257 | 331.4.1.33 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CCB1 | 0.76 | 58.0 | 6.41e-01 | 84.1% | 100.0% |
| 5007802 | 331.4.1.36 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27851 | 0.75 | 54.0 | 6.20e-01 | 81.3% | 100.0% |
| 3973638 | 331.10.1.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase | 0.74 | 60.0 | 4.63e-01 | 86.0% | 52.4% |
| 5047928 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.74 | 67.0 | 6.42e-01 | 97.2% | 93.3% |
| 4948381 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.74 | 56.0 | 6.06e-01 | 84.1% | 94.4% |
| 3228722 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.73 | 64.0 | 5.86e-01 | 92.5% | 79.3% |
| 3242625 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.73 | 58.0 | 5.79e-01 | 83.2% | 81.8% |
| 3513651 | 331.9.1.8 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 | 0.73 | 65.0 | 6.44e-01 | 97.2% | 91.8% |
| 5044863 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.73 | 66.0 | 6.14e-01 | 97.2% | 85.4% |
| 3805857 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.73 | 61.0 | 4.64e-01 | 88.8% | 83.4% |
| 3958686 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.72 | 67.0 | 5.20e-01 | 100.0% | 74.5% |
| 5047424 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.72 | 65.0 | 6.28e-01 | 97.2% | 92.5% |
| 3962288 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.72 | 61.0 | 5.77e-01 | 91.6% | 95.4% |
| 2639646 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.72 | 67.0 | 5.36e-01 | 100.0% | 75.5% |
| 4990360 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.72 | 49.0 | 5.53e-01 | 86.9% | 92.5% |
| 4996248 | 331.19.1.0 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains | 0.72 | 53.0 | 5.77e-01 | 82.2% | 92.2% |
| 5009499 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.72 | 56.0 | 5.15e-01 | 81.3% | 91.9% |
| 4228206 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.72 | 50.0 | 5.67e-01 | 71.0% | 100.0% |
| 4467967 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.72 | 56.0 | 4.01e-01 | 96.3% | 29.4% |
| 3953302 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.72 | 57.0 | 5.81e-01 | 83.2% | 100.0% |
| 3935896 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.72 | 57.0 | 5.31e-01 | 83.2% | 72.3% |
| 4928161 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.71 | 57.0 | 5.95e-01 | 85.0% | 95.0% |
| 3992359 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.71 | 56.0 | 5.83e-01 | 83.2% | 90.0% |
| 5053646 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.70 | 53.0 | 5.93e-01 | 86.0% | 100.0% |
| 3632777 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.70 | 63.0 | 5.08e-01 | 100.0% | 66.7% |
| 4596504 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.70 | 56.0 | 4.60e-01 | 85.0% | 60.5% |
| 4209630 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.69 | 63.0 | 5.05e-01 | 100.0% | 80.5% |
| 5055408 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.69 | 54.0 | 5.85e-01 | 86.0% | 98.9% |
| 4635523 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.69 | 63.0 | 4.75e-01 | 100.0% | 66.7% |
| 3684759 | 331.3.1.10 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL | 0.69 | 56.0 | 4.82e-01 | 87.9% | 90.6% |
| 5040587 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.69 | 56.0 | 4.88e-01 | 85.0% | 89.0% |
| 3579622 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.68 | 54.0 | 5.40e-01 | 83.2% | 81.8% |
| 3269530 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.68 | 59.0 | 5.01e-01 | 94.4% | 61.7% |
| 5053461 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.68 | 55.0 | 4.58e-01 | 85.0% | 76.0% |
| 3970122 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.67 | 56.0 | 4.69e-01 | 88.8% | 76.0% |
| 3250567 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.67 | 58.0 | 4.92e-01 | 94.4% | 58.3% |
| 4957801 | 12.3.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N | 0.67 | 46.0 | 3.60e-01 | 70.1% | 72.9% |
| 3781697 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.67 | 50.0 | 4.88e-01 | 81.3% | 73.0% |
| 3438388 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.66 | 58.0 | 5.36e-01 | 95.3% | 93.3% |
| 3487063 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.66 | 55.0 | 5.76e-01 | 87.9% | 100.0% |
| 3889564 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.66 | 54.0 | 4.69e-01 | 86.9% | 58.7% |
| 3787490 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.66 | 59.0 | 4.55e-01 | 100.0% | 75.5% |
| 4961625 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.66 | 53.0 | 5.23e-01 | 86.0% | 82.6% |
| 3290463 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.66 | 48.0 | 4.43e-01 | 75.7% | 94.1% |
| 3284176 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.65 | 56.0 | 5.41e-01 | 93.5% | 97.5% |
| 3841571 | 331.18.1.0 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc | 0.65 | 58.0 | 4.87e-01 | 98.1% | 61.7% |
| 3960238 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.65 | 53.0 | 4.43e-01 | 87.9% | 76.7% |
| 3288437 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.64 | 51.0 | 4.59e-01 | 86.0% | 94.7% |
| 1883345 | 1099.1.1.1 ↗ | a+b two layers › RNase inhibitor Dip › RNase inhibitor Dip › RNase inhibitor Dip › Dip | 0.64 | 44.0 | 3.33e-01 | 71.0% | 45.2% |
| 4619723 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.64 | 50.0 | 4.85e-01 | 88.8% | 74.2% |
| 3282091 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.64 | 46.0 | 4.23e-01 | 75.7% | 89.3% |
| 3208869 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.64 | 50.0 | 3.97e-01 | 85.0% | 80.9% |
| 3690532 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.63 | 57.0 | 4.58e-01 | 100.0% | 71.0% |
| 3823427 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.63 | 59.0 | 5.56e-01 | 100.0% | 91.2% |
| 3938142 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.63 | 54.0 | 4.26e-01 | 94.4% | 50.9% |
| 4937238 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.62 | 45.0 | 4.62e-01 | 86.9% | 79.0% |
| 3565109 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.60 | 54.0 | 4.52e-01 | 100.0% | 61.6% |
| 3729944 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.60 | 43.0 | 4.33e-01 | 74.8% | 88.2% |
| 3743698 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.60 | 52.0 | 3.66e-01 | 94.4% | 98.2% |
| 4059480 | 881.1.1.37 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27270 | 0.59 | 46.0 | 3.92e-01 | 82.2% | 65.7% |
| 3271478 | 304.107.1.7 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › POP1_N+POPLD | 0.59 | 52.0 | 3.70e-01 | 100.0% | 60.6% |
| 4221575 | 4099.1.1.52 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › FTA2 | 0.59 | 42.0 | 4.24e-01 | 73.8% | 88.6% |
| 4450761 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.58 | 43.0 | 3.00e-01 | 77.6% | 89.5% |
| 3277828 | 301.8.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase | 0.57 | 44.0 | 4.04e-01 | 83.2% | 87.6% |
| 4964134 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.55 | 44.0 | 4.25e-01 | 86.9% | 76.7% |
| 4930862 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.55 | 44.0 | 4.32e-01 | 88.8% | 80.0% |
| 3666577 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.55 | 44.0 | 4.55e-01 | 85.0% | 97.0% |
| 5071962 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 38.0 | 3.38e-01 | 72.0% | 60.7% |
| 5053632 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 36.0 | 3.45e-01 | 70.1% | 68.0% |
| 3476190 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 39.0 | 3.39e-01 | 77.6% | 86.5% |
| 5025492 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.52 | 47.0 | 3.71e-01 | 100.0% | 85.3% |
| None | — | 0.52 | 42.0 | 3.08e-01 | 88.8% | 37.5% | |
| 3978531 | 223.1.1.58 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › 2CSK_N | 0.51 | 41.0 | 3.58e-01 | 84.1% | 78.7% |
| 3698130 | 216.1.1.14 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med1 | 0.51 | 34.0 | 3.42e-01 | 72.9% | 67.6% |
| 3769096 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 36.0 | 3.08e-01 | 75.7% | 71.1% |
D2
high
residues 130-307
Domain cluster:
rep: LD_Run2_08_scaffold_35_prodigal-single.1__X__X__00177__D121-323
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00004.36 best | AAA | 34.6 | 3.30e-08 | 70.2% | 94.7% |
D3
medium
residues 313-347
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oogC01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.56 | 41.0 | 2.91e-01 | 100.0% | 67.9% |
| 2xz0D00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.52 | 38.0 | 3.25e-01 | 100.0% | 47.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4046072 | 7512.1.1.77 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_N | 0.62 | 43.0 | 2.64e-01 | 74.3% | 30.6% |
| 4192980 | 7572.1.1.0 ↗ | a/b three-layered sandwiches › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain | 0.51 | 39.0 | 2.50e-01 | 82.9% | 95.3% |