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ALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00213

Bact-Vir

ALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00213

Identity

Kingdom:
phage

Quality

80.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-120
PDB
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1am2A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.90 86.0 7.14e-01 100.0% 84.0%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.90 86.0 7.26e-01 100.0% 76.0%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.89 85.0 7.19e-01 100.0% 74.1%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.89 84.0 7.17e-01 100.0% 75.1%
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.88 82.0 7.45e-01 97.3% 78.0%
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.88 83.0 7.09e-01 100.0% 76.3%
2jmzA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 82.0 7.06e-01 100.0% 76.2%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 83.0 6.81e-01 100.0% 80.0%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 81.0 7.40e-01 97.3% 80.9%
2imzA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 81.0 7.36e-01 97.3% 85.2%
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 82.0 6.86e-01 100.0% 76.8%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 80.0 7.19e-01 97.3% 84.1%
1zdeA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 77.0 6.69e-01 97.3% 79.4%
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.83 79.0 7.28e-01 100.0% 98.6%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4994372 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.92 81.0 7.90e-01 96.4% 85.0%
4993853 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.91 87.0 7.45e-01 100.0% 75.8%
3949431 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 86.0 7.66e-01 100.0% 81.3%
5066389 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 86.0 7.00e-01 100.0% 76.3%
5029540 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 86.0 7.44e-01 100.0% 77.5%
4544734 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 86.0 6.75e-01 100.0% 86.7%
5031914 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 85.0 7.01e-01 100.0% 73.5%
4975503 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 85.0 7.07e-01 100.0% 79.4%
4983616 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 85.0 7.23e-01 100.0% 79.4%
5012957 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 85.0 7.14e-01 100.0% 76.6%
5014852 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 83.0 7.44e-01 100.0% 74.5%
5031634 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 83.0 7.19e-01 97.3% 81.2%
3603291 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 84.0 7.09e-01 100.0% 71.4%
4054994 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 84.0 7.15e-01 100.0% 73.5%
4971400 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 84.0 5.97e-01 100.0% 40.7%
4993732 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 76.0 7.33e-01 96.4% 80.8%
4039971 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 84.0 7.05e-01 100.0% 75.4%
2553113 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 80.0 7.57e-01 97.3% 82.8%
4457379 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 7.40e-01 97.3% 77.2%
4975578 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 84.0 6.06e-01 100.0% 43.6%
4993128 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 7.16e-01 98.2% 83.7%
4979631 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 84.0 7.47e-01 100.0% 76.0%
2524072 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 84.0 7.10e-01 100.0% 74.7%
5052154 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 7.16e-01 100.0% 75.8%
4979524 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 6.21e-01 100.0% 82.8%
5013937 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 84.0 7.19e-01 100.0% 76.4%
5046393 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 84.0 7.45e-01 100.0% 77.3%
4993437 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 82.0 7.39e-01 97.3% 91.0%
3234017 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.88 82.0 6.90e-01 97.3% 77.9%
2636473 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 7.37e-01 97.3% 75.9%
4594307 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 7.08e-01 100.0% 78.8%
4983458 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 7.14e-01 100.0% 77.0%
4992651 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 7.14e-01 100.0% 75.8%
182766 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 6.81e-01 100.0% 80.0%
5014854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 6.48e-01 100.0% 79.5%
4940943 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 7.00e-01 99.1% 77.1%
4993454 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 83.0 6.30e-01 100.0% 84.3%
4998392 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 83.0 7.12e-01 100.0% 83.6%
4943244 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 83.0 7.02e-01 100.0% 74.7%
3282306 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 81.0 7.53e-01 97.3% 83.0%
4978263 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 83.0 7.09e-01 100.0% 73.9%
4629526 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 5.79e-01 100.0% 90.6%
3257888 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 80.0 7.11e-01 96.4% 85.3%
5023539 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 7.28e-01 100.0% 76.8%
4993480 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 83.0 7.20e-01 100.0% 74.4%
4948019 69.1.1.17 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM 0.87 83.0 6.93e-01 100.0% 76.6%
4997601 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 82.0 7.46e-01 98.2% 87.9%
3230518 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.87 81.0 7.09e-01 97.3% 84.5%
4405940 242.1.1.8 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3, Intein_splicing 0.87 82.0 5.23e-01 100.0% 28.7%
5012699 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 81.0 6.84e-01 97.3% 88.2%
4127166 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 81.0 7.18e-01 97.3% 85.3%
5029355 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 80.0 7.12e-01 97.3% 82.7%
3215378 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.86 80.0 7.15e-01 97.3% 86.0%
4070999 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.86 81.0 7.07e-01 97.3% 79.4%
3603738 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 82.0 7.47e-01 99.1% 100.0%
5022295 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 82.0 7.05e-01 100.0% 75.2%
4600944 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 80.0 6.74e-01 97.3% 69.7%
4487998 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.86 80.0 6.74e-01 97.3% 69.7%
3511246 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.86 80.0 6.88e-01 97.3% 77.6%
3934143 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.86 80.0 7.34e-01 97.3% 85.7%
4999902 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 80.0 7.21e-01 97.3% 87.6%
4971412 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 6.69e-01 98.2% 78.3%
4982797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 80.0 7.23e-01 97.3% 83.4%
4984220 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 7.16e-01 100.0% 78.1%
3952464 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.86 80.0 7.23e-01 97.3% 77.9%
4872043 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 80.0 7.17e-01 98.2% 82.0%
5065032 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 80.0 6.84e-01 97.3% 86.1%
3517362 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.86 80.0 7.21e-01 97.3% 85.4%
3604439 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 81.0 6.89e-01 100.0% 72.9%
4642797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 81.0 6.88e-01 100.0% 75.9%
3963364 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.86 79.0 7.12e-01 96.4% 84.1%
5029854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 80.0 6.38e-01 100.0% 77.1%
5078549 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 81.0 7.07e-01 100.0% 75.6%
5028299 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 81.0 7.14e-01 100.0% 100.0%
4977673 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 80.0 6.16e-01 98.2% 89.8%
4565870 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 81.0 7.15e-01 100.0% 96.8%
5009161 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 80.0 5.72e-01 100.0% 85.0%
4993813 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 81.0 7.04e-01 100.0% 76.9%
4180552 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 79.0 6.77e-01 97.3% 87.9%
4993808 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 80.0 7.24e-01 99.1% 84.8%
4930433 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 80.0 7.08e-01 100.0% 98.1%
4291841 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 81.0 6.96e-01 100.0% 78.2%
5066163 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 79.0 7.22e-01 97.3% 85.0%
5002632 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 79.0 7.07e-01 98.2% 84.6%
5013038 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 81.0 7.00e-01 100.0% 73.1%
4997604 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 80.0 6.82e-01 100.0% 71.8%
3604113 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 80.0 7.25e-01 100.0% 98.6%
4993581 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 80.0 6.79e-01 100.0% 98.2%
4998394 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 76.0 6.68e-01 94.6% 86.5%
4948016 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 78.0 6.95e-01 97.3% 74.7%
4993871 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 62.0 6.17e-01 75.9% 86.1%
5028312 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 80.0 7.34e-01 100.0% 97.1%
4940699 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 80.0 7.00e-01 100.0% 98.1%
2323756 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 76.0 6.71e-01 97.3% 86.7%
4941327 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 75.0 6.77e-01 93.8% 100.0%
259963 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.83 79.0 7.28e-01 100.0% 98.6%
4680886 69.1.1.14 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint_2 0.81 76.0 6.57e-01 100.0% 98.8%
4404140 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 74.0 6.24e-01 100.0% 71.4%
4932851 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.77 72.0 6.71e-01 100.0% 95.6%
D2 high residues 134-348
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17289.9 best Terminase_6C 44.5 2.30e-11 76.7% 92.3%