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AM265639.1__CAK24987.1__X__00019
Bact-VirAM265639.1__CAK24987.1__X__00019
Identity
- Accession:
- AM265639 ↗
- Kingdom:
- phage
Quality
65.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Stubburvirus›
Pseudomonas_phage_LKA1
TaxID: 386793
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-128
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1at9A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 43.0 | 3.15e-01 | 72.2% | 62.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5020161 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.63 | 44.0 | 3.58e-01 | 72.2% | 39.6% |
| 3491689 | 604.1.1.159 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TMEM120A-B | 0.62 | 46.0 | 4.16e-01 | 77.8% | 95.0% |
| 3697442 | 109.4.1.819 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec8_C | 0.56 | 47.0 | 3.31e-01 | 95.6% | 54.5% |