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AP-endonuclease
Euk-VirPithovirus_sibericum
AP-endonuclease__YP_009001195__Pithovirus_sibericum__1450746
Identity
- Accession:
- YP_009001195 ↗
- Protein ID:
- AP-endonuclease
- Kingdom:
- euk
Quality
59.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Pithoviridae›
Alphapithovirus›
Pithovirus_sibericum
TaxID: 1450746
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 223-459
Domain cluster:
rep: IMGVR_UViG_3300028602_000031-3300028602-Ga0265294_1000081842__D4-242
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01261.31 best | AP_endonuc_2 | 105.0 | 7.70e-30 | 86.9% | 79.5% |
CATH (88)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xp3A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.90 | 87.0 | 7.96e-01 | 100.0% | 86.2% |
| 1qtwA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.90 | 87.0 | 8.04e-01 | 100.0% | 90.2% |
| 2x7vA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.89 | 86.0 | 7.98e-01 | 100.0% | 89.5% |
| 3aamA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.87 | 84.0 | 7.98e-01 | 100.0% | 90.7% |
| 3wqoA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.84 | 81.0 | 7.65e-01 | 100.0% | 88.9% |
| 3ayvD00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.82 | 73.0 | 7.29e-01 | 100.0% | 90.6% |
| 3itlD00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.80 | 77.0 | 6.20e-01 | 100.0% | 65.6% |
| 1i60A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.80 | 77.0 | 7.23e-01 | 100.0% | 88.0% |
| 3tvaA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.79 | 76.0 | 7.11e-01 | 100.0% | 87.6% |
| 3dx5A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.78 | 75.0 | 7.11e-01 | 100.0% | 91.6% |
| 2qw5A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.78 | 74.0 | 6.57e-01 | 100.0% | 82.9% |
| 3u0hA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.78 | 74.0 | 6.93e-01 | 100.0% | 87.5% |
| 2q02A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.77 | 73.0 | 6.93e-01 | 100.0% | 86.8% |
| 4r9xA00 | 3.20.20.380 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Copper homeostasis (CutC) domain | 0.77 | 62.0 | 6.38e-01 | 100.0% | 87.9% |
| 3tc3B00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.77 | 73.0 | 6.76e-01 | 100.0% | 91.0% |
| 1twdA00 | 3.20.20.380 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Copper homeostasis (CutC) domain | 0.76 | 60.0 | 6.12e-01 | 100.0% | 82.9% |
| 4n4pD00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 60.0 | 5.61e-01 | 100.0% | 67.7% |
| 3cprA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 61.0 | 5.58e-01 | 100.0% | 65.6% |
| 4ovxA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.75 | 72.0 | 6.85e-01 | 100.0% | 88.5% |
| 1f6kC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 59.0 | 5.52e-01 | 100.0% | 67.4% |
| 7lvlA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 61.0 | 5.72e-01 | 100.0% | 69.8% |
| 1fdyB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 61.0 | 5.67e-01 | 100.0% | 68.7% |
| 3n2xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 62.0 | 5.69e-01 | 100.0% | 68.5% |
| 3tuuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 59.0 | 5.40e-01 | 100.0% | 63.8% |
| 2r8wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 61.0 | 5.65e-01 | 100.0% | 68.7% |
| 1mzhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 59.0 | 6.08e-01 | 100.0% | 87.1% |
| 3mkcA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.74 | 60.0 | 6.09e-01 | 100.0% | 85.2% |
| 4uxdA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 59.0 | 5.65e-01 | 100.0% | 72.3% |
| 3di1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 60.0 | 5.57e-01 | 100.0% | 69.0% |
| 4nq1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 60.0 | 5.55e-01 | 100.0% | 69.0% |
| 3lerA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 60.0 | 5.52e-01 | 100.0% | 67.7% |
| 4xkyA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 60.0 | 5.52e-01 | 100.0% | 67.8% |
| 7fc0E01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.73 | 69.0 | 6.69e-01 | 100.0% | 91.5% |
| 3ndoA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 60.0 | 6.16e-01 | 100.0% | 90.2% |
| 4ur7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 59.0 | 5.38e-01 | 100.0% | 65.7% |
| 5c54G00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 60.0 | 5.51e-01 | 100.0% | 67.1% |
| 7dz9A01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.71 | 67.0 | 6.49e-01 | 100.0% | 91.1% |
| 3atyB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 67.0 | 5.66e-01 | 100.0% | 83.6% |
| 4qnwA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 66.0 | 5.67e-01 | 100.0% | 81.0% |
| 7fevA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 66.0 | 5.45e-01 | 100.0% | 76.8% |
| 1ps9A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 66.0 | 5.64e-01 | 100.0% | 79.1% |
| 1wzaA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 65.0 | 5.66e-01 | 100.0% | 77.9% |
| 3kw3A02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.68 | 52.0 | 5.45e-01 | 97.5% | 87.3% |
| 1j93A00 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.68 | 64.0 | 5.57e-01 | 100.0% | 87.5% |
| 2aamC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 63.0 | 5.92e-01 | 100.0% | 90.2% |
| 2xsaA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 63.0 | 5.96e-01 | 100.0% | 90.6% |
| 5diyA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 63.0 | 5.76e-01 | 100.0% | 83.1% |
| 2a4aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 60.0 | 5.95e-01 | 100.0% | 90.8% |
| 1u1jA01 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.67 | 62.0 | 5.17e-01 | 100.0% | 80.4% |
| 3fndA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 60.0 | 5.81e-01 | 100.0% | 86.1% |
| 3qyqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 62.0 | 5.88e-01 | 100.0% | 86.1% |
| 3ciwA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 61.0 | 5.34e-01 | 99.2% | 82.1% |
| 1lt7B00 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.66 | 61.0 | 5.54e-01 | 100.0% | 76.8% |
| 5yrpA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.66 | 53.0 | 5.49e-01 | 98.3% | 88.8% |
| 6lcjD01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 5.68e-01 | 100.0% | 93.5% |
| 4kruA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.65 | 51.0 | 5.36e-01 | 98.7% | 89.3% |
| 4mozD00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 58.0 | 5.27e-01 | 97.9% | 71.9% |
| 6ndsA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 5.58e-01 | 100.0% | 79.0% |
| 3bg3A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 5.45e-01 | 100.0% | 75.7% |
| 1to3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 59.0 | 5.51e-01 | 97.9% | 79.7% |
| 3ik4A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.64 | 55.0 | 5.48e-01 | 96.2% | 87.6% |
| 2ftpA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 60.0 | 5.52e-01 | 100.0% | 80.7% |
| 4fhdA02 | 3.80.30.30 | Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › | 0.64 | 53.0 | 5.41e-01 | 86.9% | 100.0% |
| 1f6yA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.64 | 57.0 | 5.52e-01 | 98.7% | 86.4% |
| 5swuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 57.0 | 5.61e-01 | 95.4% | 94.0% |
| 1sfsA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 53.0 | 5.54e-01 | 99.2% | 97.2% |
| 1t7lB01 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.63 | 59.0 | 4.98e-01 | 100.0% | 81.7% |
| 7ympE01 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.61 | 58.0 | 5.46e-01 | 100.0% | 95.0% |
| 3paoB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 56.0 | 5.09e-01 | 98.7% | 96.8% |
| 3d0cB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 56.0 | 5.19e-01 | 100.0% | 78.3% |
| 3dmyA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.59 | 33.0 | 4.15e-01 | 97.0% | 89.3% |
| 4h08A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 46.0 | 4.94e-01 | 87.3% | 95.0% |
| 1bwpA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.58 | 45.0 | 4.78e-01 | 86.9% | 90.6% |
| 3lm3A01 | 3.20.20.510 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Uncharacterised protein PF12979, DUF3863 | 0.58 | 53.0 | 4.85e-01 | 100.0% | 83.9% |
| 5mp7A01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 39.0 | 4.60e-01 | 91.6% | 99.4% |
| 2c4kA01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 39.0 | 4.52e-01 | 91.1% | 98.8% |
| 2jl1A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 37.0 | 4.28e-01 | 99.6% | 91.2% |
| 2qtfA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 38.0 | 4.40e-01 | 98.7% | 96.4% |
| 1ivnA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.56 | 41.0 | 4.62e-01 | 92.4% | 99.4% |
| 2vptA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.55 | 44.0 | 4.71e-01 | 98.3% | 96.0% |
| 3e48A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 38.0 | 4.21e-01 | 96.6% | 91.3% |
| 4i8iA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.52 | 44.0 | 4.34e-01 | 89.5% | 95.4% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 46.0 | 4.27e-01 | 97.0% | 95.2% |
| 3kp1A04 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.51 | 32.0 | 3.90e-01 | 98.7% | 96.7% |
| 2qu8A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 4.09e-01 | 94.5% | 91.2% |
| 1to6A01 | 3.40.50.10350 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycerate kinase; domain 1 | 0.51 | 31.0 | 3.85e-01 | 89.5% | 99.3% |
| 4l6wA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 39.0 | 4.18e-01 | 99.2% | 92.8% |
| 4e94A01 | 3.40.50.10740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Murein tetrapeptidase LD-carboxypeptidase, N-terminal domain | 0.50 | 34.0 | 3.96e-01 | 98.7% | 100.0% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4489627 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.91 | 89.0 | 8.09e-01 | 100.0% | 87.5% |
| 4036590 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.91 | 88.0 | 8.24e-01 | 100.0% | 91.1% |
| 4579621 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.91 | 88.0 | 8.10e-01 | 100.0% | 89.0% |
| 4082994 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.91 | 88.0 | 8.01e-01 | 100.0% | 87.1% |
| 4521590 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 8.05e-01 | 100.0% | 88.6% |
| 3506446 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 7.47e-01 | 100.0% | 82.9% |
| 3255520 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 8.05e-01 | 100.0% | 88.6% |
| 4933857 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 8.17e-01 | 100.0% | 91.8% |
| 4031316 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 8.05e-01 | 100.0% | 87.9% |
| 4320102 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 7.92e-01 | 100.0% | 86.0% |
| 4616066 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 8.11e-01 | 100.0% | 89.4% |
| 3684953 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 7.17e-01 | 100.0% | 67.3% |
| 3589247 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 7.90e-01 | 100.0% | 85.0% |
| 4634847 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 8.06e-01 | 100.0% | 89.8% |
| 4962786 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 8.00e-01 | 100.0% | 91.7% |
| 3782510 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 7.49e-01 | 100.0% | 75.6% |
| 4997671 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 7.98e-01 | 100.0% | 88.6% |
| 4028126 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.90 | 87.0 | 7.76e-01 | 100.0% | 82.9% |
| 4662969 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.89 | 86.0 | 8.14e-01 | 100.0% | 91.3% |
| 140513 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.89 | 86.0 | 7.98e-01 | 100.0% | 89.5% |
| 4340551 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.89 | 86.0 | 8.02e-01 | 100.0% | 90.5% |
| 4654736 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.89 | 85.0 | 7.88e-01 | 100.0% | 89.0% |
| 3283012 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.87 | 83.0 | 8.09e-01 | 100.0% | 92.2% |
| 5001042 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.85 | 82.0 | 7.52e-01 | 100.0% | 86.4% |
| 5031476 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.84 | 81.0 | 7.54e-01 | 100.0% | 90.9% |
| 5083338 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.84 | 81.0 | 7.44e-01 | 100.0% | 83.7% |
| 4974619 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.84 | 79.0 | 7.75e-01 | 100.0% | 91.6% |
| 4972192 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.84 | 81.0 | 7.44e-01 | 100.0% | 86.4% |
| 5067708 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.84 | 81.0 | 7.05e-01 | 100.0% | 90.4% |
| 5071446 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.84 | 81.0 | 7.40e-01 | 100.0% | 88.5% |
| 4969820 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.84 | 80.0 | 7.53e-01 | 100.0% | 90.0% |
| 4984106 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.84 | 80.0 | 7.52e-01 | 100.0% | 90.0% |
| 4990393 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.83 | 80.0 | 7.55e-01 | 100.0% | 90.2% |
| 4932365 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.83 | 80.0 | 7.28e-01 | 100.0% | 93.0% |
| 5070822 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.83 | 80.0 | 7.67e-01 | 100.0% | 93.2% |
| 4982468 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.83 | 80.0 | 7.53e-01 | 100.0% | 90.5% |
| 5028367 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.83 | 79.0 | 7.50e-01 | 100.0% | 91.3% |
| 5055608 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.83 | 77.0 | 7.56e-01 | 100.0% | 90.9% |
| 5064690 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.82 | 79.0 | 7.51e-01 | 100.0% | 89.6% |
| 4989351 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.82 | 77.0 | 7.50e-01 | 100.0% | 90.6% |
| 5004932 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.82 | 79.0 | 7.48e-01 | 100.0% | 91.1% |
| 4934020 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.82 | 79.0 | 7.53e-01 | 100.0% | 90.6% |
| 4959961 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.81 | 77.0 | 7.41e-01 | 100.0% | 88.3% |
| 4255133 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.81 | 77.0 | 6.17e-01 | 100.0% | 64.2% |
| 311794 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.80 | 77.0 | 6.17e-01 | 100.0% | 64.3% |
| 3602450 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.80 | 76.0 | 6.96e-01 | 100.0% | 84.0% |
| 5079607 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.80 | 76.0 | 7.34e-01 | 100.0% | 90.0% |
| 5012989 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.80 | 75.0 | 7.20e-01 | 100.0% | 87.5% |
| 4878526 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.80 | 76.0 | 7.36e-01 | 100.0% | 92.8% |
| 144846 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.79 | 76.0 | 7.11e-01 | 100.0% | 87.6% |
| 4214968 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.79 | 74.0 | 7.05e-01 | 100.0% | 85.6% |
| 5058718 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.79 | 76.0 | 7.31e-01 | 100.0% | 91.9% |
| 4987658 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.78 | 75.0 | 7.15e-01 | 100.0% | 91.5% |
| 4984185 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.78 | 72.0 | 7.02e-01 | 100.0% | 89.4% |
| 5012786 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.77 | 74.0 | 7.04e-01 | 100.0% | 90.7% |
| 1349789 | 2002.1.1.119 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › CutC | 0.77 | 62.0 | 6.37e-01 | 100.0% | 87.6% |
| 3504243 | 2002.1.1.119 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › CutC | 0.76 | 60.0 | 5.99e-01 | 100.0% | 79.2% |
| 4393639 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.75 | 61.0 | 5.60e-01 | 100.0% | 66.7% |
| 5079568 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.74 | 60.0 | 5.52e-01 | 100.0% | 66.0% |
| 4268842 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.74 | 60.0 | 5.46e-01 | 100.0% | 64.3% |
| 4306948 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.73 | 60.0 | 5.53e-01 | 100.0% | 67.3% |
| 2834370 | 2002.1.1.136 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF692 | 0.73 | 69.0 | 6.67e-01 | 100.0% | 89.7% |
| 2833601 | 2002.1.1.136 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF692 | 0.73 | 69.0 | 6.64e-01 | 100.0% | 89.8% |
| 4014813 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.71 | 57.0 | 5.75e-01 | 100.0% | 83.3% |
| 4146766 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.69 | 62.0 | 5.78e-01 | 100.0% | 77.9% |
| 2775457 | 2002.1.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase | 0.69 | 64.0 | 5.22e-01 | 100.0% | 76.6% |
| 3696439 | 2002.1.1.100 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA | 0.69 | 61.0 | 5.82e-01 | 100.0% | 81.1% |
| 3983359 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.69 | 45.0 | 5.36e-01 | 87.8% | 96.2% |
| 3800597 | 2002.1.1.150 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAGidase | 0.69 | 64.0 | 4.99e-01 | 100.0% | 50.5% |
| 4009663 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.68 | 53.0 | 5.38e-01 | 100.0% | 80.4% |
| 4975341 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.67 | 63.0 | 5.56e-01 | 100.0% | 87.1% |
| 4605530 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.67 | 62.0 | 5.65e-01 | 100.0% | 75.8% |
| 4180126 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.67 | 63.0 | 5.44e-01 | 100.0% | 83.7% |
| 3283842 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.67 | 54.0 | 5.78e-01 | 98.7% | 97.6% |
| 4934301 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.66 | 61.0 | 5.19e-01 | 100.0% | 61.3% |
| 3518421 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.66 | 61.0 | 5.30e-01 | 100.0% | 84.9% |
| 3624128 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.66 | 60.0 | 5.53e-01 | 100.0% | 76.4% |
| 3395950 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.66 | 61.0 | 5.52e-01 | 100.0% | 75.9% |
| 4660219 | 2002.1.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM | 0.65 | 58.0 | 5.74e-01 | 96.6% | 89.8% |
| 2723561 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.64 | 59.0 | 5.47e-01 | 97.9% | 78.5% |
| 3256189 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.64 | 60.0 | 5.17e-01 | 100.0% | 85.8% |
| 4230187 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.63 | 58.0 | 5.14e-01 | 97.5% | 94.5% |
| 4074134 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.63 | 59.0 | 5.41e-01 | 100.0% | 78.7% |
| 3966674 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.62 | 59.0 | 5.45e-01 | 100.0% | 81.4% |
| 4233743 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.62 | 58.0 | 5.37e-01 | 100.0% | 84.1% |
| 3980075 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.61 | 54.0 | 5.11e-01 | 97.9% | 79.6% |
| 5043211 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 55.0 | 5.48e-01 | 97.5% | 99.2% |
| None | — | 0.61 | 55.0 | 4.89e-01 | 97.9% | 87.1% | |
| 3481070 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.61 | 56.0 | 4.92e-01 | 99.2% | 90.6% |
| 4948507 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.58 | 46.0 | 5.02e-01 | 89.5% | 98.5% |
| 1498229 | 2002.3.1.7 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › DUF3863 | 0.57 | 53.0 | 4.78e-01 | 100.0% | 80.6% |
| 4240206 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.56 | 49.0 | 3.90e-01 | 91.1% | 89.8% |
| 5046299 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.56 | 50.0 | 4.64e-01 | 93.2% | 89.7% |
| 4977622 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.56 | 49.0 | 4.42e-01 | 93.2% | 80.3% |
| 4956871 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.54 | 47.0 | 4.26e-01 | 93.2% | 78.0% |
| 4089645 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.50 | 33.0 | 3.89e-01 | 78.1% | 95.2% |
D2
medium
residues 42-100
D3
medium
residues 162-212