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AP008983.1__BAE47711.1__CST013__00013
Bact-VirAP008983.1__BAE47711.1__CST013__00013
Identity
- Accession:
- AP008983 ↗
- Kingdom:
- phage
Quality
86.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 402-495
Domain cluster:
rep: LC597490.1__BCO16078.1__X__00025__D258-356
CATH (97)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cgaE00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.77 | 69.0 | 4.96e-01 | 97.9% | 77.6% |
| 1c3qA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.76 | 68.0 | 4.78e-01 | 97.9% | 73.6% |
| 3dzvA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.75 | 67.0 | 4.84e-01 | 100.0% | 77.7% |
| 6x50A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 59.0 | 4.54e-01 | 86.2% | 79.0% |
| 5ktkA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.73 | 64.0 | 4.13e-01 | 97.9% | 32.1% |
| 3e8xA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.73 | 62.0 | 4.80e-01 | 94.7% | 87.9% |
| 3ujpB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.72 | 62.0 | 5.34e-01 | 93.6% | 76.4% |
| 2lndA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.72 | 61.0 | 5.73e-01 | 91.5% | 84.8% |
| 6xehA01 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.72 | 60.0 | 5.71e-01 | 91.5% | 97.3% |
| 1q57G02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.72 | 61.0 | 5.57e-01 | 93.6% | 85.7% |
| 4nicA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 61.0 | 5.71e-01 | 93.6% | 97.4% |
| 2jk1A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 61.0 | 5.36e-01 | 93.6% | 83.3% |
| 1pq4A01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.72 | 62.0 | 5.25e-01 | 94.7% | 76.3% |
| 2r3bA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.71 | 64.0 | 4.59e-01 | 100.0% | 82.5% |
| 2gfqA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.71 | 56.0 | 5.77e-01 | 83.0% | 100.0% |
| 4j1qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.71 | 60.0 | 3.96e-01 | 94.7% | 29.3% |
| 1jw9B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.71 | 64.0 | 4.74e-01 | 100.0% | 80.4% |
| 2n3zA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 60.0 | 5.94e-01 | 94.7% | 87.9% |
| 1dcfA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 63.0 | 5.64e-01 | 100.0% | 93.2% |
| 3m6mD00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 60.0 | 5.60e-01 | 93.6% | 95.8% |
| 3eodA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 62.0 | 5.85e-01 | 98.9% | 98.3% |
| 1tt5C01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 62.0 | 4.31e-01 | 100.0% | 90.0% |
| 4bmdA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.69 | 61.0 | 6.03e-01 | 100.0% | 90.9% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 59.0 | 5.64e-01 | 94.7% | 91.8% |
| 1b6sA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 49.0 | 5.56e-01 | 77.7% | 100.0% |
| 5tebG00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.69 | 59.0 | 4.96e-01 | 93.6% | 96.2% |
| 1oywA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 54.0 | 4.85e-01 | 85.1% | 85.6% |
| 2vosA01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.69 | 59.0 | 4.16e-01 | 95.7% | 80.1% |
| 1rljA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.68 | 61.0 | 5.44e-01 | 100.0% | 90.4% |
| 1vddA03 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.68 | 51.0 | 5.20e-01 | 79.8% | 100.0% |
| 1yqeA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.68 | 60.0 | 6.03e-01 | 96.8% | 97.9% |
| 3al2A02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.67 | 54.0 | 5.35e-01 | 100.0% | 83.5% |
| 1vw3D00 | 3.40.1370.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L4; Chain: A; › Ribosomal protein L4/L1 | 0.67 | 46.0 | 3.43e-01 | 71.3% | 29.3% |
| 3hb7A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.67 | 57.0 | 4.64e-01 | 96.8% | 98.9% |
| 1w4rA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 53.0 | 4.74e-01 | 86.2% | 63.6% |
| 3hg7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 57.0 | 5.22e-01 | 95.7% | 89.6% |
| 4wesB04 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.66 | 48.0 | 4.79e-01 | 93.6% | 73.5% |
| 5v7nA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 56.0 | 5.05e-01 | 94.7% | 85.0% |
| 3fijC00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.65 | 56.0 | 4.30e-01 | 95.7% | 97.7% |
| 2rbgA00 | 3.40.50.11100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 49.0 | 4.50e-01 | 80.9% | 96.8% |
| 4pg4A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 55.0 | 4.62e-01 | 94.7% | 88.7% |
| 5d6nA00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.64 | 55.0 | 3.54e-01 | 97.9% | 21.9% |
| 4dimA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 48.0 | 4.42e-01 | 79.8% | 79.0% |
| 3mfqA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.63 | 54.0 | 4.78e-01 | 95.7% | 85.8% |
| 2fokA03 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.63 | 49.0 | 4.09e-01 | 86.2% | 89.7% |
| 1ipaA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.62 | 52.0 | 4.54e-01 | 95.7% | 93.5% |
| 3lftB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 54.0 | 4.73e-01 | 98.9% | 92.5% |
| 3fhlA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 53.0 | 4.73e-01 | 97.9% | 95.7% |
| 3e82B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 52.0 | 4.60e-01 | 95.7% | 91.1% |
| 1gcuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 52.0 | 4.60e-01 | 95.7% | 91.7% |
| 4bu0A01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.62 | 54.0 | 5.34e-01 | 100.0% | 92.9% |
| 3uenA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.62 | 53.0 | 5.17e-01 | 100.0% | 85.7% |
| 2eklA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 51.0 | 4.80e-01 | 95.7% | 96.7% |
| 6b4kB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 55.0 | 4.52e-01 | 100.0% | 87.1% |
| 2k2wA00 | 3.40.50.10980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nibrin, BRCT2 domain | 0.61 | 53.0 | 5.12e-01 | 100.0% | 92.8% |
| 4o1hA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 52.0 | 4.92e-01 | 98.9% | 97.5% |
| 3qtgA03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.61 | 39.0 | 3.70e-01 | 86.2% | 53.0% |
| 5ve3A02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.61 | 51.0 | 4.89e-01 | 95.7% | 80.4% |
| 1ofuX00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 48.0 | 4.50e-01 | 86.2% | 82.2% |
| 3flhB00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.61 | 51.0 | 4.75e-01 | 94.7% | 76.9% |
| 3g5jA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.61 | 50.0 | 4.56e-01 | 92.6% | 91.5% |
| 4ixoA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.60 | 53.0 | 4.02e-01 | 100.0% | 57.1% |
| 2zpaA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 51.0 | 4.59e-01 | 95.7% | 79.4% |
| 2cf5A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 50.0 | 4.34e-01 | 94.7% | 84.7% |
| 2pjdA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 46.0 | 3.86e-01 | 85.1% | 77.4% |
| 3e53A00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.60 | 52.0 | 3.46e-01 | 100.0% | 34.6% |
| 2hx1A02 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 53.0 | 4.90e-01 | 100.0% | 95.1% |
| 1yt8A02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.59 | 49.0 | 4.76e-01 | 94.7% | 86.1% |
| 7zllA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 50.0 | 3.60e-01 | 93.6% | 35.0% |
| 1jcmP00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 52.0 | 3.81e-01 | 98.9% | 70.7% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.59 | 52.0 | 4.57e-01 | 100.0% | 80.6% |
| 3fdbA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 50.0 | 3.90e-01 | 96.8% | 73.3% |
| 4mgrA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 50.0 | 3.43e-01 | 100.0% | 38.1% |
| 3kkiA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 51.0 | 3.87e-01 | 100.0% | 63.4% |
| 3e18A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 50.0 | 4.50e-01 | 98.9% | 96.3% |
| 4rgyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 50.0 | 3.83e-01 | 100.0% | 88.2% |
| 2d5lA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 50.0 | 3.75e-01 | 100.0% | 85.7% |
| 4j8lA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.57 | 50.0 | 3.72e-01 | 97.9% | 53.1% |
| 2p2sA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 47.0 | 4.24e-01 | 94.7% | 92.7% |
| 4iw7A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 48.0 | 3.79e-01 | 100.0% | 61.4% |
| 1yt8A03 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.56 | 44.0 | 4.46e-01 | 86.2% | 90.1% |
| 7ejgC01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 43.0 | 4.26e-01 | 88.3% | 80.6% |
| 1to0D00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.56 | 45.0 | 3.99e-01 | 92.6% | 94.0% |
| 2npoA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 40.0 | 4.40e-01 | 78.7% | 100.0% |
| 3mweB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 47.0 | 4.24e-01 | 97.9% | 93.5% |
| 4ggmX02 | 3.40.140.80 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › LpxI C-terminal catalytic domain | 0.55 | 44.0 | 3.81e-01 | 88.3% | 82.7% |
| 2zadA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 48.0 | 3.68e-01 | 100.0% | 81.7% |
| 4bucA03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.55 | 48.0 | 4.32e-01 | 100.0% | 71.1% |
| 4n6dA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.54 | 45.0 | 3.21e-01 | 93.6% | 44.8% |
| 3mpkA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 41.0 | 4.10e-01 | 86.2% | 81.1% |
| 2vz9A05 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 47.0 | 3.51e-01 | 100.0% | 67.5% |
| 4do7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 47.0 | 3.40e-01 | 100.0% | 79.9% |
| 1sr8A03 | 3.40.50.10720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CbiD-like domains | 0.53 | 39.0 | 4.00e-01 | 78.7% | 82.2% |
| 4dzrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 3.88e-01 | 100.0% | 84.7% |
| 4i6kA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 44.0 | 3.31e-01 | 100.0% | 80.1% |
| 1gtkA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 39.0 | 3.87e-01 | 90.4% | 77.0% |
| 4powA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 41.0 | 3.85e-01 | 90.4% | 71.4% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969233 | 2007.1.3.73 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 | 0.84 | 75.0 | 7.35e-01 | 95.7% | 97.0% |
| 4615208 | 2007.2.2.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › DUF2325 | 0.83 | 74.0 | 7.22e-01 | 93.6% | 97.0% |
| 4936294 | 2007.1.3.73 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 | 0.82 | 74.0 | 7.01e-01 | 97.9% | 89.1% |
| 4681655 | 4978.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › DUF2325 | 0.82 | 72.0 | 7.21e-01 | 93.6% | 96.8% |
| 4209208 | 2007.1.2.17 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF2325 | 0.81 | 71.0 | 7.16e-01 | 94.7% | 100.0% |
| 4637998 | 2007.2.2.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › DUF2325 | 0.81 | 71.0 | 7.15e-01 | 94.7% | 100.0% |
| 4185336 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.79 | 71.0 | 5.06e-01 | 97.9% | 80.0% |
| 4579167 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.77 | 69.0 | 5.04e-01 | 97.9% | 73.9% |
| 4073136 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.77 | 69.0 | 4.95e-01 | 97.9% | 80.8% |
| 4111525 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.77 | 69.0 | 4.98e-01 | 97.9% | 80.4% |
| 4108091 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.77 | 69.0 | 4.90e-01 | 97.9% | 77.6% |
| 4087168 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.77 | 68.0 | 4.90e-01 | 97.9% | 78.5% |
| 4294614 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.76 | 68.0 | 4.86e-01 | 97.9% | 77.3% |
| None | — | 0.76 | 68.0 | 4.87e-01 | 97.9% | 78.5% | |
| 4320659 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.76 | 68.0 | 4.80e-01 | 97.9% | 78.6% |
| 4049592 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.76 | 68.0 | 4.74e-01 | 97.9% | 78.9% |
| 4350349 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.76 | 67.0 | 4.69e-01 | 97.9% | 75.7% |
| 4223141 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.76 | 67.0 | 4.82e-01 | 97.9% | 76.1% |
| 4273752 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.75 | 56.0 | 5.81e-01 | 78.7% | 100.0% |
| 4449274 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.75 | 68.0 | 4.83e-01 | 100.0% | 75.7% |
| 4581585 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.75 | 67.0 | 4.80e-01 | 97.9% | 78.9% |
| 4268768 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.74 | 64.0 | 4.63e-01 | 95.7% | 78.1% |
| 5047117 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.74 | 63.0 | 5.00e-01 | 93.6% | 92.6% |
| 4318430 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.74 | 65.0 | 4.65e-01 | 97.9% | 75.6% |
| 3345384 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.74 | 65.0 | 4.88e-01 | 97.9% | 67.0% |
| 4619533 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.73 | 65.0 | 4.60e-01 | 98.9% | 77.2% |
| 4184183 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.73 | 65.0 | 4.70e-01 | 100.0% | 78.1% |
| 3172002 | 2007.25.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domain in Ribosomal protein L1 › Rossmann-like domain in Ribosomal protein L1 › Ribosomal_L1 | 0.73 | 66.0 | 6.57e-01 | 98.9% | 98.9% |
| 5082259 | 7597.1.1.0 ↗ | a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain | 0.72 | 60.0 | 5.60e-01 | 89.4% | 88.7% |
| 3590757 | 2003.6.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Carb_kinase | 0.72 | 64.0 | 4.55e-01 | 97.9% | 80.0% |
| 4343882 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.72 | 64.0 | 4.63e-01 | 98.9% | 78.0% |
| 4252028 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.72 | 65.0 | 4.63e-01 | 100.0% | 78.5% |
| 3970353 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.72 | 61.0 | 5.60e-01 | 94.7% | 90.4% |
| 4547613 | 2003.6.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Carb_kinase | 0.72 | 63.0 | 4.53e-01 | 97.9% | 80.0% |
| 1295874 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.72 | 61.0 | 5.12e-01 | 94.7% | 75.3% |
| 4111477 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.71 | 64.0 | 4.68e-01 | 100.0% | 82.0% |
| 4454328 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.71 | 63.0 | 4.58e-01 | 98.9% | 81.5% |
| 3227763 | 2003.6.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Carb_kinase | 0.71 | 62.0 | 4.38e-01 | 97.9% | 74.4% |
| 5078389 | 3930.1.1.17 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › Helicase_C | 0.70 | 57.0 | 4.20e-01 | 86.2% | 46.0% |
| 4962858 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.70 | 60.0 | 5.49e-01 | 94.7% | 90.4% |
| 4948692 | 206.1.3.120 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › LysX_preATP_grasp | 0.70 | 59.0 | 3.98e-01 | 93.6% | 98.9% |
| 5002802 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.69 | 57.0 | 5.85e-01 | 100.0% | 94.4% |
| 4926930 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.69 | 59.0 | 4.75e-01 | 94.7% | 97.8% |
| 2051857 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.69 | 59.0 | 5.51e-01 | 94.7% | 92.3% |
| 5068766 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.69 | 52.0 | 4.45e-01 | 80.9% | 76.8% |
| 4957020 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.69 | 59.0 | 4.67e-01 | 94.7% | 90.3% |
| 4247326 | 2004.1.1.105 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase | 0.69 | 52.0 | 5.00e-01 | 78.7% | 84.8% |
| 3972391 | 2003.6.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like | 0.69 | 60.0 | 4.37e-01 | 98.9% | 80.7% |
| 3502242 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 58.0 | 4.93e-01 | 94.7% | 96.9% |
| 4663074 | 2004.1.1.105 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase | 0.68 | 51.0 | 4.81e-01 | 78.7% | 77.4% |
| 5040668 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.68 | 59.0 | 5.23e-01 | 95.7% | 92.6% |
| 5029329 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.68 | 54.0 | 5.14e-01 | 86.2% | 100.0% |
| 3223797 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.68 | 58.0 | 4.83e-01 | 94.7% | 74.5% |
| 5007345 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.67 | 55.0 | 5.14e-01 | 90.4% | 85.7% |
| 4500471 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.67 | 61.0 | 5.62e-01 | 100.0% | 80.0% |
| 3326805 | 2003.1.11.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like | 0.66 | 57.0 | 4.88e-01 | 94.7% | 72.7% |
| 3235584 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.66 | 56.0 | 4.71e-01 | 94.7% | 75.2% |
| 5058048 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.66 | 51.0 | 4.41e-01 | 94.7% | 54.3% |
| 4965747 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.66 | 50.0 | 5.30e-01 | 98.9% | 96.2% |
| 5016918 | 2003.1.1.50 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF364 | 0.66 | 58.0 | 5.14e-01 | 96.8% | 86.7% |
| 3267396 | 2484.3.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N | 0.66 | 56.0 | 4.70e-01 | 94.7% | 86.7% |
| 5028292 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.65 | 54.0 | 5.21e-01 | 93.6% | 93.6% |
| 4333665 | 2007.1.1.43 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase, Peptidase_C26 | 0.65 | 58.0 | 4.36e-01 | 100.0% | 78.3% |
| 3717821 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.65 | 58.0 | 5.44e-01 | 100.0% | 91.3% |
| 4060734 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.65 | 57.0 | 5.79e-01 | 96.8% | 100.0% |
| 5043992 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.65 | 54.0 | 4.56e-01 | 93.6% | 93.9% |
| 3816467 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.64 | 55.0 | 4.82e-01 | 95.7% | 77.9% |
| 4962731 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.64 | 56.0 | 5.28e-01 | 97.9% | 93.9% |
| 4999079 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.64 | 53.0 | 4.31e-01 | 93.6% | 98.4% |
| 3988979 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 49.0 | 4.73e-01 | 84.0% | 77.3% |
| 3364946 | 7568.1.1.4 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_2 | 0.63 | 51.0 | 4.49e-01 | 100.0% | 57.9% |
| 3415335 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.62 | 55.0 | 4.70e-01 | 100.0% | 95.5% |
| None | — | 0.62 | 50.0 | 4.49e-01 | 100.0% | 62.2% | |
| 3611837 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.62 | 52.0 | 4.47e-01 | 94.7% | 68.4% |
| 4241471 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.61 | 52.0 | 4.77e-01 | 93.6% | 75.2% |
| 3367466 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.61 | 50.0 | 4.11e-01 | 93.6% | 77.8% |
| 160078 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.60 | 46.0 | 4.47e-01 | 83.0% | 91.4% |
| 4970478 | 2003.1.5.33 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0146 | 0.60 | 53.0 | 4.63e-01 | 100.0% | 92.4% |
| 4028522 | 7568.1.1.4 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_2 | 0.60 | 51.0 | 4.83e-01 | 100.0% | 79.1% |
| 3966021 | 7603.1.1.1 ↗ | a/b three-layered sandwiches › Immunomodulating metalloprotease IMPa N-terminal domain › Immunomodulating metalloprotease IMPa N-terminal domain › Immunomodulating metalloprotease IMPa N-terminal domain › IMPa_N_2 | 0.59 | 46.0 | 3.54e-01 | 85.1% | 35.1% |
| 3988514 | 2003.1.1.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_3 | 0.59 | 51.0 | 4.77e-01 | 97.9% | 95.0% |
| 5043802 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 48.0 | 4.53e-01 | 89.4% | 100.0% |
| 1276802 | 7562.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › TPK_catalytic | 0.58 | 44.0 | 4.03e-01 | 84.0% | 100.0% |
| 195327 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.58 | 49.0 | 3.62e-01 | 92.6% | 65.6% |
| 3287973 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.58 | 50.0 | 3.37e-01 | 98.9% | 37.9% |
| 5013182 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.58 | 48.0 | 4.31e-01 | 95.7% | 81.2% |
| 4945877 | 2488.1.1.4 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Trm56 | 0.57 | 47.0 | 4.07e-01 | 94.7% | 91.3% |
| 4967280 | 2003.1.11.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like | 0.57 | 48.0 | 4.22e-01 | 97.9% | 82.7% |
| 2049376 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.57 | 45.0 | 4.34e-01 | 87.2% | 85.2% |
| 3887203 | 207.1.1.47 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_6 | 0.56 | 44.0 | 2.88e-01 | 85.1% | 39.8% |
| 3608024 | 7528.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_I | 0.56 | 49.0 | 3.86e-01 | 98.9% | 69.5% |
| 5058237 | 2488.1.1.4 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Trm56 | 0.56 | 47.0 | 3.93e-01 | 94.7% | 60.6% |
| 4121473 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.55 | 45.0 | 4.08e-01 | 94.7% | 95.6% |
| 148415 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.52 | 45.0 | 3.26e-01 | 100.0% | 72.5% |
| 2813717 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 44.0 | 3.55e-01 | 97.9% | 88.4% |
D2
medium
residues 2-178
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cvvA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 33.0 | 3.76e-01 | 99.4% | 84.7% |
| 3p5pA03 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 39.0 | 3.34e-01 | 79.7% | 91.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3647621 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.56 | 39.0 | 3.83e-01 | 70.6% | 92.8% |
| 4631214 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 39.0 | 3.97e-01 | 71.8% | 91.8% |
| 3828269 | 5001.1.1.87 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › EXS | 0.53 | 39.0 | 3.04e-01 | 75.1% | 92.3% |