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AP008983.1__BAE47725.1__CST027__00027
Bact-VirAP008983.1__BAE47725.1__CST027__00027
Identity
- Accession:
- AP008983 ↗
- Kingdom:
- phage
Quality
85.8
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-133
Domain cluster:
rep: OK896991.1__UDY80742.1__X__00073__D5-103
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02452.24 best | PemK_toxin | 74.3 | 1.20e-20 | 86.5% | 97.2% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ne8A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.95 | 77.0 | 8.33e-01 | 89.5% | 95.7% |
| 5uctB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.94 | 66.0 | 7.69e-01 | 86.5% | 96.0% |
| 5hk0B00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.93 | 72.0 | 8.03e-01 | 89.5% | 98.1% |
| 1m1fB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.91 | 70.0 | 7.85e-01 | 88.0% | 99.0% |
| 3jscA00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.87 | 60.0 | 7.08e-01 | 87.2% | 96.9% |
| 1ub4A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 64.0 | 7.30e-01 | 93.2% | 99.0% |
| 4rmoA00 | 3.10.129.130 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.74 | 61.0 | 5.83e-01 | 87.2% | 85.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 35.0 | 4.47e-01 | 72.9% | 75.9% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 33.0 | 4.85e-01 | 72.2% | 100.0% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 35.0 | 4.79e-01 | 72.2% | 95.5% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 33.0 | 4.57e-01 | 71.4% | 91.0% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 31.0 | 4.65e-01 | 70.7% | 100.0% |
| 4glkA00 | 3.10.129.130 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.68 | 56.0 | 5.19e-01 | 87.2% | 81.8% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 35.0 | 4.76e-01 | 73.7% | 98.5% |
| 5f3yA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 35.0 | 4.50e-01 | 73.7% | 87.0% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 34.0 | 4.69e-01 | 76.7% | 98.5% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 33.0 | 4.63e-01 | 76.7% | 100.0% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 33.0 | 4.54e-01 | 72.9% | 100.0% |
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 38.0 | 4.76e-01 | 82.7% | 100.0% |
| 2phcB02 | 2.40.100.10 | Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like | 0.60 | 27.0 | 2.73e-01 | 95.5% | 40.6% |
| 2k5fA01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.60 | 34.0 | 4.20e-01 | 79.7% | 90.4% |
| 1pnjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 34.0 | 4.17e-01 | 75.2% | 90.7% |
| 2epdA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 28.0 | 3.51e-01 | 72.2% | 80.3% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 32.0 | 3.57e-01 | 80.5% | 72.0% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.54 | 44.0 | 4.27e-01 | 84.2% | 84.2% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 33.0 | 3.42e-01 | 89.5% | 61.5% |
| 4ft4B01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.54 | 44.0 | 4.25e-01 | 85.7% | 87.3% |
| 3ptaA04 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.53 | 46.0 | 4.16e-01 | 95.5% | 87.6% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.53 | 46.0 | 4.38e-01 | 90.2% | 89.4% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2125775 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.96 | 69.0 | 7.86e-01 | 93.2% | 94.2% |
| 4667326 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.95 | 77.0 | 8.35e-01 | 88.7% | 95.7% |
| 3955085 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.94 | 70.0 | 8.07e-01 | 88.0% | 100.0% |
| 1109151 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.94 | 77.0 | 8.14e-01 | 89.5% | 92.5% |
| 3951374 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.94 | 73.0 | 8.22e-01 | 92.5% | 100.0% |
| 2046239 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.94 | 66.0 | 7.69e-01 | 86.5% | 96.0% |
| 4645229 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.94 | 72.0 | 8.00e-01 | 88.0% | 96.3% |
| 3955562 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.93 | 71.0 | 8.06e-01 | 88.7% | 99.0% |
| 4950222 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.93 | 73.0 | 8.10e-01 | 89.5% | 98.2% |
| 3587639 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.92 | 73.0 | 8.11e-01 | 90.2% | 100.0% |
| 1952922 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.92 | 72.0 | 7.97e-01 | 89.5% | 98.2% |
| 2643543 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.91 | 79.0 | 8.27e-01 | 94.7% | 96.7% |
| 5065801 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.91 | 69.0 | 7.78e-01 | 88.7% | 99.0% |
| 3290347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.90 | 64.0 | 7.46e-01 | 88.0% | 98.0% |
| 2832038 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.90 | 71.0 | 7.65e-01 | 89.5% | 93.9% |
| 2702587 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.90 | 71.0 | 7.75e-01 | 92.5% | 97.3% |
| 4267554 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.89 | 73.0 | 7.95e-01 | 90.2% | 99.1% |
| 2507392 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.89 | 69.0 | 7.52e-01 | 91.0% | 93.8% |
| 4928262 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.89 | 72.0 | 7.92e-01 | 89.5% | 100.0% |
| 5027789 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.89 | 65.0 | 7.47e-01 | 88.7% | 99.0% |
| 5012680 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.89 | 71.0 | 7.79e-01 | 88.7% | 99.1% |
| 5045554 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.89 | 75.0 | 7.97e-01 | 95.5% | 97.5% |
| 5062749 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.88 | 71.0 | 7.71e-01 | 88.7% | 96.5% |
| 3964273 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.88 | 72.0 | 7.74e-01 | 92.5% | 98.3% |
| 3589640 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.86 | 69.0 | 7.56e-01 | 92.5% | 100.0% |
| 3502443 | 4.1.1.23 ↗ | beta barrels › SH3 › SH3 › SH3 › CcdB | 0.85 | 63.0 | 7.22e-01 | 88.7% | 100.0% |
| 4938225 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.85 | 64.0 | 7.21e-01 | 88.0% | 99.0% |
| 4969376 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.84 | 69.0 | 7.39e-01 | 91.0% | 96.6% |
| 4008775 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.83 | 71.0 | 6.99e-01 | 88.7% | 97.9% |
| 5013823 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.83 | 71.0 | 7.19e-01 | 88.7% | 100.0% |
| 4961922 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 64.0 | 6.98e-01 | 88.7% | 97.2% |
| 4950603 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.82 | 65.0 | 7.01e-01 | 91.0% | 94.8% |
| 3965064 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.82 | 73.0 | 7.56e-01 | 94.7% | 98.4% |
| 3955877 | 4.1.1.432 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27466 | 0.81 | 59.0 | 6.74e-01 | 88.7% | 99.0% |
| 4034169 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.80 | 71.0 | 6.93e-01 | 99.2% | 85.4% |
| 3694663 | 4.1.1.179 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6590 | 0.75 | 65.0 | 5.98e-01 | 92.5% | 98.2% |
| 3691426 | 4.1.1.179 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6590 | 0.74 | 67.0 | 6.03e-01 | 94.7% | 99.4% |
| 1688342 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 62.0 | 5.88e-01 | 88.0% | 85.2% |
| 3636066 | 4.1.1.179 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6590 | 0.74 | 66.0 | 6.18e-01 | 94.7% | 96.9% |
| 3728463 | 4.1.1.179 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6590 | 0.74 | 66.0 | 5.98e-01 | 94.7% | 97.7% |
| 3589730 | 4.1.1.252 ↗ | beta barrels › SH3 › SH3 › SH3 › MdcG_N | 0.72 | 41.0 | 5.17e-01 | 76.7% | 92.5% |
| 3554293 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.72 | 35.0 | 5.01e-01 | 74.4% | 96.9% |
| 4016602 | 4.1.1.179 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6590 | 0.72 | 64.0 | 6.27e-01 | 94.7% | 100.0% |
| 3879164 | 4.1.1.91 ↗ | beta barrels › SH3 › SH3 › SH3 › hSH3 | 0.70 | 32.0 | 4.27e-01 | 70.7% | 78.7% |
| 3268923 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 38.0 | 4.23e-01 | 78.9% | 67.6% |
| 5029166 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 38.0 | 5.09e-01 | 77.4% | 100.0% |
| 3631165 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 39.0 | 4.83e-01 | 81.2% | 91.8% |
| 3492018 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 37.0 | 4.09e-01 | 78.9% | 68.6% |
| 5050368 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.66 | 41.0 | 4.75e-01 | 88.7% | 84.7% |
| 3234274 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.65 | 35.0 | 4.74e-01 | 82.0% | 100.0% |
| 4021478 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 34.0 | 4.14e-01 | 77.4% | 78.8% |
| 3500084 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 34.0 | 4.50e-01 | 75.2% | 98.6% |
| 3879216 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 34.0 | 4.40e-01 | 70.7% | 93.3% |
| 4952114 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.62 | 34.0 | 4.48e-01 | 77.4% | 100.0% |
| 3612182 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 40.0 | 4.88e-01 | 73.7% | 100.0% |
| 3596626 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 4.43e-01 | 83.5% | 80.0% |
| 5042313 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.60 | 34.0 | 4.35e-01 | 78.9% | 98.7% |
| 3897602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 38.0 | 4.41e-01 | 86.5% | 90.5% |
| 3995388 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.59 | 35.0 | 3.74e-01 | 78.9% | 65.8% |
| 3310575 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.59 | 41.0 | 4.64e-01 | 82.0% | 91.4% |
| 3484620 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.58 | 40.0 | 4.70e-01 | 82.7% | 100.0% |
| 3830656 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.58 | 43.0 | 4.58e-01 | 83.5% | 85.8% |
| 3617549 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.56 | 34.0 | 3.74e-01 | 84.2% | 74.3% |
| 3606838 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 32.0 | 3.70e-01 | 80.5% | 77.9% |
| 3995481 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.55 | 33.0 | 3.71e-01 | 84.2% | 77.0% |
| 3836457 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.53 | 45.0 | 4.32e-01 | 88.7% | 90.0% |
| 3773104 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 42.0 | 4.21e-01 | 85.7% | 85.2% |
| 3828823 | 3324.1.1.2 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.52 | 48.0 | 3.78e-01 | 99.2% | 50.9% |
| 3267804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 36.0 | 4.09e-01 | 81.2% | 97.0% |
| 3331962 | 4.1.1.247 ↗ | beta barrels › SH3 › SH3 › SH3 › RRM_DME | 0.51 | 40.0 | 3.88e-01 | 83.5% | 95.3% |
D2
high
residues 141-211
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.76 | 56.0 | 6.03e-01 | 83.1% | 90.2% |
| 4ivfA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.75 | 52.0 | 4.40e-01 | 73.2% | 69.8% |
| 1ailA00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.74 | 56.0 | 5.65e-01 | 80.3% | 97.1% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.73 | 51.0 | 4.64e-01 | 71.8% | 63.7% |
| 2yw6B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 52.0 | 4.01e-01 | 74.6% | 71.3% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.72 | 60.0 | 5.30e-01 | 88.7% | 93.0% |
| 1grjA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.71 | 51.0 | 5.02e-01 | 74.6% | 82.4% |
| 3dyjA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.69 | 58.0 | 4.41e-01 | 93.0% | 71.1% |
| 4i17A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 52.0 | 3.63e-01 | 81.7% | 37.1% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.67 | 45.0 | 4.07e-01 | 70.4% | 80.8% |
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 53.0 | 4.77e-01 | 87.3% | 86.7% |
| 5fhiA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 51.0 | 4.02e-01 | 81.7% | 79.9% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 49.0 | 4.75e-01 | 80.3% | 74.7% |
| 6adqG01 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.66 | 57.0 | 4.19e-01 | 94.4% | 73.0% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 50.0 | 4.42e-01 | 83.1% | 91.3% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.65 | 45.0 | 4.49e-01 | 73.2% | 94.6% |
| 1zvzA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.65 | 46.0 | 3.85e-01 | 74.6% | 42.7% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.65 | 52.0 | 4.63e-01 | 87.3% | 88.2% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 53.0 | 3.93e-01 | 90.1% | 81.2% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.64 | 46.0 | 3.89e-01 | 74.6% | 62.1% |
| 2kbbA00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.64 | 57.0 | 4.29e-01 | 100.0% | 71.3% |
| 5ux2B01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 52.0 | 3.66e-01 | 87.3% | 35.0% |
| 2bl2A00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.63 | 45.0 | 3.51e-01 | 74.6% | 34.6% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.63 | 45.0 | 3.48e-01 | 73.2% | 69.3% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.63 | 43.0 | 4.19e-01 | 73.2% | 68.3% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 45.0 | 4.00e-01 | 76.1% | 88.1% |
| 1bhaA00 | 1.10.287.170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 40.0 | 4.14e-01 | 74.6% | 71.6% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 43.0 | 4.42e-01 | 73.2% | 80.0% |
| 1ed1A00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.60 | 46.0 | 3.98e-01 | 83.1% | 58.8% |
| 6p6jB01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.60 | 54.0 | 3.53e-01 | 100.0% | 87.9% |
| 1bgcA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 44.0 | 3.45e-01 | 81.7% | 100.0% |
| 3nyjA00 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.59 | 45.0 | 3.40e-01 | 83.1% | 51.4% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 4.63e-01 | 90.1% | 90.9% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 3.94e-01 | 76.1% | 70.1% |
| 2e9xD01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 43.0 | 3.48e-01 | 80.3% | 59.1% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.57 | 46.0 | 2.91e-01 | 91.5% | 55.2% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 39.0 | 3.26e-01 | 84.5% | 39.4% |
| 5haxA01 | 1.20.58.1780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 45.0 | 3.21e-01 | 95.8% | 52.3% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 37.0 | 3.69e-01 | 73.2% | 71.8% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.52 | 40.0 | 3.71e-01 | 90.1% | 71.7% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995787 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.76 | 59.0 | 6.13e-01 | 83.1% | 100.0% |
| 4492735 | 4982.1.1.1 ↗ | alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › KaiA | 0.75 | 64.0 | 5.23e-01 | 93.0% | 53.1% |
| 3227761 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.73 | 51.0 | 3.33e-01 | 73.2% | 86.3% |
| 3732397 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.71 | 50.0 | 4.14e-01 | 73.2% | 87.5% |
| 4977386 | 601.13.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar export chaperone FliS › Flagellar export chaperone FliS | 0.71 | 56.0 | 5.25e-01 | 84.5% | 100.0% |
| 3413169 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.70 | 49.0 | 3.74e-01 | 73.2% | 48.5% |
| 3999857 | 632.6.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit | 0.70 | 48.0 | 4.75e-01 | 77.5% | 68.0% |
| 3579324 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.69 | 53.0 | 4.11e-01 | 84.5% | 82.5% |
| 3666680 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.68 | 48.0 | 3.38e-01 | 74.6% | 50.7% |
| 3361950 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.68 | 48.0 | 3.30e-01 | 73.2% | 64.8% |
| 3971758 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.68 | 48.0 | 4.49e-01 | 73.2% | 69.4% |
| 4025 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.67 | 45.0 | 4.07e-01 | 70.4% | 80.8% |
| 1299675 | 3065.1.1.1 ↗ | alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › ANIS5_cation-bd | 0.67 | 46.0 | 3.73e-01 | 71.8% | 41.8% |
| 3878295 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.66 | 54.0 | 4.27e-01 | 90.1% | 78.0% |
| 3333417 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.66 | 47.0 | 4.35e-01 | 74.6% | 60.0% |
| 5009776 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.66 | 52.0 | 4.51e-01 | 84.5% | 98.1% |
| 2410389 | 5039.1.1.1 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › COX3 | 0.66 | 57.0 | 4.05e-01 | 94.4% | 64.0% |
| 4933898 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.65 | 45.0 | 4.46e-01 | 73.2% | 67.9% |
| 3734939 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.65 | 45.0 | 4.67e-01 | 73.2% | 83.1% |
| 3709988 | 1189.1.1.0 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor | 0.65 | 44.0 | 3.35e-01 | 70.4% | 30.3% |
| 4010235 | 5050.1.1.10 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 | 0.62 | 51.0 | 3.51e-01 | 88.7% | 57.4% |
| 3591222 | 604.1.1.198 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › BAG | 0.62 | 46.0 | 4.21e-01 | 80.3% | 87.4% |
| 4577554 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.61 | 45.0 | 4.14e-01 | 78.9% | 69.5% |
| 5016145 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.60 | 42.0 | 4.21e-01 | 74.6% | 72.0% |
| 4180835 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.57 | 39.0 | 3.95e-01 | 73.2% | 81.4% |
| 4954895 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.56 | 40.0 | 3.76e-01 | 76.1% | 61.1% |
| 4393704 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 45.0 | 2.81e-01 | 100.0% | 37.8% |
| 3270287 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.51 | 42.0 | 3.05e-01 | 95.8% | 80.0% |