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AP008983.1__BAE47770.1__CST072__00072
Bact-VirAP008983.1__BAE47770.1__CST072__00072
Identity
- Accession:
- AP008983 ↗
- Kingdom:
- phage
Quality
73.0
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 139-245
Domain cluster:
rep: OP753453.1__WAB24442.1__X__00067__D80-189
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3czbA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.76 | 68.0 | 5.70e-01 | 100.0% | 59.4% |
| 1qcsA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.76 | 56.0 | 6.34e-01 | 99.1% | 100.0% |
| 2g5dA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.74 | 68.0 | 5.42e-01 | 100.0% | 52.2% |
| 2ae0X01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.73 | 69.0 | 5.65e-01 | 100.0% | 97.2% |
| 4avrA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.72 | 60.0 | 6.38e-01 | 98.1% | 100.0% |
| 4jcwA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.70 | 63.0 | 6.47e-01 | 100.0% | 99.0% |
| 3hu1A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.69 | 52.0 | 5.45e-01 | 99.1% | 87.5% |
| 3sumB00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.66 | 61.0 | 5.54e-01 | 98.1% | 89.0% |
| 2kqaA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.62 | 55.0 | 5.34e-01 | 96.3% | 92.5% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 49.0 | 4.63e-01 | 100.0% | 71.0% |
| 1h0hA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.59 | 53.0 | 4.47e-01 | 98.1% | 74.4% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.58 | 26.0 | 3.16e-01 | 73.8% | 63.6% |
| 2d7eA01 | 3.40.1440.60 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain | 0.58 | 29.0 | 3.18e-01 | 96.3% | 56.7% |
| 6b9tF01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 30.0 | 2.86e-01 | 100.0% | 41.6% |
| 4il7A00 | 2.60.120.1300 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 33.0 | 3.63e-01 | 100.0% | 71.8% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.56 | 39.0 | 4.49e-01 | 97.2% | 100.0% |
| 3ffjA04 | 2.60.40.4040 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 32.0 | 3.02e-01 | 100.0% | 48.0% |
| 2gfuA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 33.0 | 3.13e-01 | 100.0% | 48.5% |
| 1yloE02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.53 | 39.0 | 4.36e-01 | 98.1% | 100.0% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 42.0 | 4.29e-01 | 100.0% | 92.3% |
| 4b6wA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 34.0 | 3.74e-01 | 100.0% | 86.0% |
| 3p42A03 | 3.10.560.10 | Alpha Beta › Roll › Outer membrane lipoprotein wza fold like › Outer membrane lipoprotein wza domain like | 0.51 | 31.0 | 3.69e-01 | 98.1% | 90.5% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.51 | 40.0 | 4.25e-01 | 99.1% | 96.8% |
| 5owvD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 42.0 | 3.33e-01 | 91.6% | 95.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083293 | 1.1.2.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › 3D | 0.86 | 72.0 | 7.28e-01 | 100.0% | 89.5% |
| 3267279 | 1.1.2.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF28663 | 0.77 | 72.0 | 6.95e-01 | 100.0% | 97.5% |
| 3976753 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.76 | 63.0 | 5.55e-01 | 100.0% | 62.7% |
| 4419943 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.74 | 63.0 | 6.52e-01 | 100.0% | 96.0% |
| 3933010 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 58.0 | 5.92e-01 | 100.0% | 85.7% |
| 4396535 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 52.0 | 6.00e-01 | 100.0% | 100.0% |
| 3974469 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 61.0 | 6.41e-01 | 99.1% | 100.0% |
| 4370157 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.72 | 63.0 | 5.63e-01 | 100.0% | 69.2% |
| 3312403 | 1.1.2.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › KWL1 | 0.72 | 66.0 | 6.23e-01 | 98.1% | 88.0% |
| 3617423 | 1.1.2.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N | 0.70 | 57.0 | 6.07e-01 | 99.1% | 96.8% |
| 3010131 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.70 | 63.0 | 6.36e-01 | 100.0% | 95.3% |
| 4995354 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 53.0 | 5.91e-01 | 98.1% | 100.0% |
| 3391395 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.66 | 55.0 | 5.67e-01 | 100.0% | 95.0% |
| 218540 | 1.1.2.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Cerato-platanin | 0.65 | 60.0 | 5.50e-01 | 97.2% | 88.9% |
| 3597196 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.65 | 53.0 | 5.61e-01 | 100.0% | 97.9% |
| 4989870 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.62 | 58.0 | 4.55e-01 | 100.0% | 62.9% |
| 3978661 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.62 | 32.0 | 3.55e-01 | 95.3% | 61.1% |
| 4011239 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 42.0 | 4.72e-01 | 100.0% | 92.5% |
| 4350337 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.61 | 41.0 | 4.75e-01 | 100.0% | 97.3% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 39.0 | 4.60e-01 | 100.0% | 97.1% |
| 5009968 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.61 | 31.0 | 3.44e-01 | 94.4% | 61.2% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 39.0 | 4.47e-01 | 100.0% | 92.0% |
| 4937158 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 34.0 | 4.24e-01 | 100.0% | 98.3% |
| 2595014 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.58 | 53.0 | 4.59e-01 | 99.1% | 81.5% |
| 4932697 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 34.0 | 4.29e-01 | 98.1% | 98.5% |
| 4246959 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.58 | 48.0 | 4.64e-01 | 92.5% | 85.6% |
| 2418779 | 10.2.1.60 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › STIV_penton_2nd | 0.57 | 33.0 | 3.58e-01 | 100.0% | 68.2% |
| 3507639 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.55 | 35.0 | 4.16e-01 | 98.1% | 97.1% |
| 3237442 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 46.0 | 4.74e-01 | 100.0% | 96.0% |
| 5056535 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 34.0 | 3.88e-01 | 98.1% | 83.7% |
| 3959732 | 10.39.1.0 ↗ | beta sandwiches › jelly-roll › Soluble domain of MmpS4 › Soluble domain of MmpS4 | 0.54 | 28.0 | 3.10e-01 | 95.3% | 61.2% |
| 3222026 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.53 | 32.0 | 3.16e-01 | 100.0% | 55.7% |
| 3807153 | 221.1.1.88 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CLU_N | 0.53 | 34.0 | 3.54e-01 | 100.0% | 70.0% |
| 3205796 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 35.0 | 3.42e-01 | 100.0% | 62.5% |
| 4020715 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.51 | 34.0 | 3.45e-01 | 100.0% | 66.4% |
| 3386428 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.50 | 40.0 | 3.26e-01 | 87.9% | 70.2% |
| 3488420 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.50 | 33.0 | 3.53e-01 | 100.0% | 76.8% |
| 3593982 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 34.0 | 3.51e-01 | 100.0% | 74.0% |
D2
medium
residues 47-100