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AP008983.1__BAE47825.1__CST127__00127
Bact-VirAP008983.1__BAE47825.1__CST127__00127
Identity
- Accession:
- AP008983 ↗
- Kingdom:
- phage
Quality
79.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-60
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bs4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 44.0 | 2.93e-01 | 70.0% | 70.6% |
| 1qmgB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 42.0 | 2.99e-01 | 85.0% | 58.8% |
| 4ivkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 42.0 | 2.68e-01 | 93.3% | 69.1% |
| 4kx7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.53 | 43.0 | 3.02e-01 | 93.3% | 72.1% |
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 43.0 | 2.83e-01 | 98.3% | 97.2% |
| 5jd5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 42.0 | 2.79e-01 | 100.0% | 62.8% |
| 6w0pA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.50 | 43.0 | 2.62e-01 | 100.0% | 96.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2764515 | 7579.1.1.49 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › GCE_fung | 0.60 | 46.0 | 2.90e-01 | 88.3% | 87.7% |
| 3960475 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.55 | 40.0 | 2.84e-01 | 80.0% | 65.7% |
| 3471770 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 44.0 | 2.68e-01 | 98.3% | 75.8% |
| 4987649 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.53 | 36.0 | 2.47e-01 | 70.0% | 35.2% |
D2
medium
residues 179-290
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.72 | 57.0 | 5.26e-01 | 94.6% | 67.4% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 44.0 | 4.67e-01 | 85.7% | 95.9% |
| 8onuA01 | 2.60.450.10 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › Lipopolysaccharide (LPS) transport protein A like domain | 0.56 | 45.0 | 4.54e-01 | 87.5% | 96.4% |
| 2wkkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 38.0 | 3.50e-01 | 84.8% | 53.3% |
| 3gmvX00 | 3.10.450.730 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › BLIP domain | 0.55 | 45.0 | 4.11e-01 | 90.2% | 91.0% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 43.0 | 4.40e-01 | 84.8% | 86.2% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 34.0 | 3.22e-01 | 77.7% | 51.1% |
| 2jj6A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 37.0 | 3.52e-01 | 77.7% | 58.2% |
| 6jwfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 46.0 | 3.23e-01 | 94.6% | 52.1% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 36.0 | 3.24e-01 | 83.0% | 48.4% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 32.0 | 3.38e-01 | 82.1% | 64.7% |
| 2i52B00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.52 | 36.0 | 3.63e-01 | 90.2% | 69.0% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 38.0 | 3.56e-01 | 82.1% | 63.7% |
| 4u1eI00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 3.17e-01 | 94.6% | 49.7% |
| 2zxqA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 43.0 | 3.78e-01 | 94.6% | 92.6% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 42.0 | 3.12e-01 | 91.1% | 64.2% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 40.0 | 3.39e-01 | 83.0% | 96.6% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1099835 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.80 | 62.0 | 6.38e-01 | 96.4% | 84.9% |
| 3943894 | 77.1.1.7 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › DUF1481 | 0.69 | 54.0 | 5.25e-01 | 93.8% | 74.4% |
| 3311784 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.68 | 52.0 | 5.06e-01 | 95.5% | 72.0% |
| 4008120 | 5.1.5.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 | 0.68 | 54.0 | 5.27e-01 | 93.8% | 77.5% |
| 3772693 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.67 | 57.0 | 4.64e-01 | 99.1% | 49.5% |
| 4030599 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.66 | 55.0 | 5.08e-01 | 99.1% | 69.9% |
| 3561693 | 77.1.1.2 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › FAM194 | 0.65 | 47.0 | 4.28e-01 | 94.6% | 56.0% |
| 3598356 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.65 | 53.0 | 5.53e-01 | 95.5% | 93.3% |
| 3539857 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.63 | 58.0 | 4.62e-01 | 100.0% | 59.5% |
| 4246471 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.63 | 35.0 | 3.06e-01 | 71.4% | 34.3% |
| 3968293 | 71.2.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › DUF3108 | 0.62 | 52.0 | 4.21e-01 | 95.5% | 47.6% |
| 3965839 | 77.1.1.6 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 | 0.62 | 58.0 | 5.14e-01 | 100.0% | 75.5% |
| 3268625 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.61 | 56.0 | 4.39e-01 | 100.0% | 52.4% |
| 4188272 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.58 | 37.0 | 3.28e-01 | 78.6% | 45.3% |
| 4029687 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.58 | 48.0 | 4.61e-01 | 92.0% | 76.9% |
| 4197307 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.58 | 40.0 | 3.54e-01 | 84.8% | 49.1% |
| 2723017 | 3894.1.1.0 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain | 0.57 | 48.0 | 4.66e-01 | 98.2% | 81.5% |
| 4127270 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.57 | 40.0 | 3.40e-01 | 84.8% | 46.0% |
| 3177497 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.57 | 46.0 | 3.71e-01 | 90.2% | 52.1% |
| 3229482 | 71.1.1.19 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 | 0.57 | 44.0 | 3.56e-01 | 83.0% | 43.9% |
| 3953440 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.57 | 44.0 | 3.41e-01 | 82.1% | 97.1% |
| 4200177 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.55 | 47.0 | 4.53e-01 | 96.4% | 81.5% |
| 3890932 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 40.0 | 2.88e-01 | 78.6% | 75.6% |
| 4583479 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.54 | 36.0 | 3.17e-01 | 83.9% | 45.1% |
| 3273629 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.53 | 45.0 | 3.35e-01 | 94.6% | 90.8% |
| 4024399 | 844.1.1.1 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Tub | 0.53 | 45.0 | 3.45e-01 | 92.9% | 54.2% |
| 3984133 | 3735.1.1.12 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell | 0.52 | 48.0 | 2.76e-01 | 100.0% | 11.2% |
| 5046458 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.52 | 39.0 | 3.42e-01 | 92.9% | 50.9% |
| 4997755 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.51 | 37.0 | 3.19e-01 | 90.2% | 47.2% |
| 3738128 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.51 | 42.0 | 3.62e-01 | 93.8% | 57.4% |
| 4025875 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.51 | 42.0 | 3.44e-01 | 93.8% | 54.2% |
D3
medium
residues 448-544
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.82 | 49.0 | 6.06e-01 | 84.5% | 96.7% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.80 | 58.0 | 4.82e-01 | 97.9% | 45.9% |
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.70 | 59.0 | 5.23e-01 | 100.0% | 64.5% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.69 | 44.0 | 4.16e-01 | 71.1% | 53.9% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.69 | 44.0 | 4.15e-01 | 81.4% | 53.4% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.68 | 43.0 | 3.98e-01 | 82.5% | 50.0% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.63 | 47.0 | 4.26e-01 | 78.4% | 100.0% |
| 1zhxA03 | 2.40.160.120 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 51.0 | 4.15e-01 | 92.8% | 66.0% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.60 | 45.0 | 3.69e-01 | 79.4% | 97.7% |
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.58 | 52.0 | 3.15e-01 | 100.0% | 15.0% |
| 5xnrA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 51.0 | 3.82e-01 | 96.9% | 75.6% |
| 3uuwB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 41.0 | 3.44e-01 | 85.6% | 40.8% |
| 1tltA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 41.0 | 3.41e-01 | 85.6% | 40.3% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.56 | 50.0 | 4.58e-01 | 96.9% | 91.3% |
| 4cvbA00 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.56 | 48.0 | 3.08e-01 | 100.0% | 34.9% |
| 3i2nA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 49.0 | 3.41e-01 | 100.0% | 49.9% |
| 1k8kC00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 46.0 | 3.23e-01 | 94.8% | 70.3% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.55 | 27.0 | 2.92e-01 | 70.1% | 52.3% |
| 1nr0A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 48.0 | 3.42e-01 | 100.0% | 64.1% |
| 6u5uG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.54 | 45.0 | 4.06e-01 | 89.7% | 97.0% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 44.0 | 3.72e-01 | 87.6% | 64.1% |
| 3jb9L00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 47.0 | 3.38e-01 | 99.0% | 56.0% |
| 4zovB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 3.19e-01 | 99.0% | 57.9% |
| 7qi3A01 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.53 | 44.0 | 3.11e-01 | 91.8% | 90.9% |
| 4g56D00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 3.30e-01 | 97.9% | 48.5% |
| 4upiA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.53 | 45.0 | 2.88e-01 | 94.8% | 84.8% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 46.0 | 3.28e-01 | 100.0% | 69.7% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 45.0 | 3.16e-01 | 96.9% | 49.7% |
| 4i79A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 3.27e-01 | 100.0% | 50.3% |
| 2vqrA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.52 | 44.0 | 2.85e-01 | 93.8% | 88.2% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.52 | 45.0 | 4.17e-01 | 95.9% | 85.8% |
| 3ijcA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 46.0 | 3.17e-01 | 100.0% | 58.0% |
| 8hpoK01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 2.97e-01 | 95.9% | 38.4% |
| 1gxrA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 3.14e-01 | 97.9% | 45.7% |
| 6yleA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 3.04e-01 | 97.9% | 54.1% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 40.0 | 3.17e-01 | 83.5% | 52.9% |
| 4pswB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 3.11e-01 | 100.0% | 58.7% |
| 4o9dA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 3.04e-01 | 100.0% | 48.1% |
| 7uhyA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 3.13e-01 | 96.9% | 41.9% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 45.0 | 3.35e-01 | 100.0% | 57.3% |
| 7pthC01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.50 | 41.0 | 2.65e-01 | 89.7% | 79.7% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 43.0 | 3.05e-01 | 100.0% | 48.1% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030652 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.80 | 57.0 | 4.82e-01 | 95.9% | 47.3% |
| 3711004 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.77 | 57.0 | 5.18e-01 | 95.9% | 59.2% |
| 3504473 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.73 | 55.0 | 4.44e-01 | 97.9% | 42.2% |
| 3471142 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.73 | 53.0 | 4.17e-01 | 94.8% | 38.4% |
| 3764875 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.71 | 57.0 | 4.56e-01 | 96.9% | 43.7% |
| 4946049 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.70 | 45.0 | 4.89e-01 | 91.8% | 78.8% |
| 3733356 | 298.1.1.25 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › ox_reductase_C | 0.69 | 55.0 | 4.57e-01 | 84.5% | 61.2% |
| 3703650 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.66 | 48.0 | 5.34e-01 | 81.4% | 97.3% |
| 4339016 | 3523.1.1.1 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG | 0.62 | 48.0 | 4.68e-01 | 82.5% | 77.1% |
| 3972476 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.61 | 50.0 | 4.39e-01 | 94.8% | 59.3% |
| 4188272 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.61 | 44.0 | 3.71e-01 | 77.3% | 45.9% |
| 3614351 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.59 | 55.0 | 4.39e-01 | 100.0% | 73.2% |
| 4114374 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.59 | 44.0 | 3.57e-01 | 87.6% | 41.1% |
| 3867654 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.58 | 43.0 | 3.60e-01 | 87.6% | 44.7% |
| 4488185 | 3772.1.1.1 ↗ | beta sandwiches › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › FecR | 0.58 | 46.0 | 4.08e-01 | 84.5% | 97.1% |
| 3735647 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.58 | 51.0 | 3.42e-01 | 99.0% | 59.3% |
| 4372560 | 71.1.1.6 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LppX_LprAFG | 0.58 | 42.0 | 3.35e-01 | 85.6% | 36.3% |
| 3847839 | 6129.1.1.0 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family | 0.58 | 42.0 | 3.13e-01 | 87.6% | 30.4% |
| 3532301 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.58 | 44.0 | 3.45e-01 | 87.6% | 38.5% |
| 3396245 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.57 | 49.0 | 3.89e-01 | 92.8% | 46.8% |
| 3763426 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.57 | 43.0 | 3.46e-01 | 87.6% | 40.0% |
| 3234953 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.57 | 44.0 | 3.41e-01 | 87.6% | 37.2% |
| 4215116 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.57 | 41.0 | 3.35e-01 | 87.6% | 40.6% |
| 3279025 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.57 | 52.0 | 3.76e-01 | 99.0% | 58.8% |
| 3562895 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.57 | 41.0 | 3.32e-01 | 87.6% | 39.5% |
| 4154416 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.57 | 43.0 | 3.54e-01 | 87.6% | 44.6% |
| 4951953 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.57 | 42.0 | 3.47e-01 | 84.5% | 40.5% |
| 3973760 | 3772.1.1.1 ↗ | beta sandwiches › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › FecR | 0.57 | 45.0 | 4.23e-01 | 86.6% | 98.3% |
| 3303080 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.56 | 43.0 | 3.63e-01 | 85.6% | 46.3% |
| None | — | 0.56 | 45.0 | 3.44e-01 | 88.7% | 66.3% | |
| 3724738 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.56 | 47.0 | 3.29e-01 | 91.8% | 86.7% |
| 3617898 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.56 | 52.0 | 4.49e-01 | 100.0% | 78.6% |
| 3846048 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.56 | 42.0 | 3.33e-01 | 87.6% | 38.0% |
| 5018105 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.55 | 42.0 | 3.58e-01 | 84.5% | 48.5% |
| 4246135 | 7515.1.1.5 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,SGSH_C | 0.54 | 47.0 | 3.01e-01 | 94.8% | 77.7% |
| 3538099 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.54 | 40.0 | 3.27e-01 | 87.6% | 41.7% |
| 3941288 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.54 | 42.0 | 3.70e-01 | 83.5% | 63.4% |
| None | — | 0.54 | 42.0 | 3.35e-01 | 87.6% | 40.4% | |
| 3914165 | 5.1.4.269 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, HELP, Beta-prop_EML | 0.54 | 47.0 | 3.22e-01 | 99.0% | 42.2% |
| 1949187 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.53 | 42.0 | 3.72e-01 | 87.6% | 59.9% |
| 3219424 | 5.1.4.585 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29539, PF29566 | 0.53 | 46.0 | 3.00e-01 | 100.0% | 35.2% |
| 4296952 | 5.1.4.250 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF2415 | 0.53 | 44.0 | 3.08e-01 | 92.8% | 34.1% |
| 3716389 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.53 | 47.0 | 3.23e-01 | 100.0% | 35.9% |
| 3742310 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.52 | 44.0 | 3.21e-01 | 96.9% | 60.0% |
| 5053804 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.52 | 40.0 | 3.27e-01 | 85.6% | 41.5% |
| 4891045 | 5.1.4.391 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CFAP43_N | 0.52 | 44.0 | 3.04e-01 | 95.9% | 44.7% |
| 4680317 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.52 | 45.0 | 3.48e-01 | 99.0% | 68.1% |
| 3213025 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.52 | 40.0 | 3.23e-01 | 82.5% | 95.8% |
| 3692276 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.52 | 42.0 | 3.21e-01 | 88.7% | 84.3% |
| 4989777 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 43.0 | 3.07e-01 | 93.8% | 41.3% |
| 5034643 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.51 | 31.0 | 3.26e-01 | 80.4% | 65.2% |
| 4436563 | 5.1.4.171 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HELP+Beta-prop_EML | 0.51 | 42.0 | 3.01e-01 | 93.8% | 48.4% |
| 3317211 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.51 | 43.0 | 3.48e-01 | 93.8% | 53.7% |
| 3636703 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 42.0 | 2.75e-01 | 92.8% | 32.5% |