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AP011617.1__BAK53702.1__TMA_014__00014

Bact-Vir

AP011617.1__BAK53702.1__TMA_014__00014

Identity

Accession:
AP011617 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thermus_phage_TMA

TaxID: 699370

Cluster

View cluster (57 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-118
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r5uC00 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.77 70.0 6.53e-01 97.4% 86.2%
6qelA01 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.76 68.0 6.16e-01 96.5% 78.8%
3bgwA01 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.73 65.0 6.26e-01 96.5% 86.3%
2odmA00 1.10.287.750 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like 0.65 28.0 3.37e-01 90.4% 58.2%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.62 30.0 3.34e-01 93.9% 56.0%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.62 32.0 3.31e-01 96.5% 50.5%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 34.0 3.61e-01 100.0% 58.7%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.28e-01 90.4% 66.9%
3k3oA02 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 30.0 3.47e-01 92.2% 63.1%
5af7B03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 33.0 3.06e-01 96.5% 42.6%
3ddlA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.58 45.0 3.53e-01 81.7% 94.8%
2gf4A00 1.20.1270.110 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 0.58 37.0 4.23e-01 80.9% 85.2%
1un8A02 1.25.40.340 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain 0.58 42.0 3.55e-01 74.8% 87.0%
1qu7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.55 32.0 2.57e-01 96.5% 29.1%
2prrA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.54 42.0 4.10e-01 82.6% 96.1%
5gviA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.54 40.0 2.91e-01 76.5% 29.8%
3o60A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 34.0 3.01e-01 89.6% 40.7%
3ddeB00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.53 42.0 3.33e-01 82.6% 97.0%
2oyoA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.51 41.0 4.07e-01 87.8% 99.2%
2jbrA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.51 31.0 2.64e-01 96.5% 36.8%
8bs9A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 38.0 2.87e-01 80.0% 33.3%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.50 28.0 3.43e-01 92.2% 85.1%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3206514 192.2.1.6 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_3 0.62 42.0 4.10e-01 70.4% 71.5%
3893810 4207.1.1.25 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › MINAR1_N 0.60 34.0 3.73e-01 79.1% 67.4%
3963952 3684.1.1.26 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › SirB 0.55 30.0 2.92e-01 91.3% 47.6%
5059222 5060.2.1.1 ↗ alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF 0.54 39.0 3.89e-01 74.8% 76.7%
3261464 604.6.1.1 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT 0.54 38.0 3.96e-01 100.0% 77.3%
3635930 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.53 34.0 3.04e-01 96.5% 47.7%
3312807 3922.1.1.7 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Auxin_canalis 0.51 44.0 4.12e-01 96.5% 75.2%
3872309 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.51 45.0 3.69e-01 95.7% 91.2%
3456942 5048.1.1.1 ↗ alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › MIP 0.50 36.0 3.31e-01 73.9% 66.0%
D2 high residues 179-377
PDB
Domain cluster: rep: LD_Run2_08_scaffold_35_prodigal-single.1__X__X__00177__D121-323
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03796.22 best DnaB_C 166.7 9.10e-49 100.0% 78.8%
PF13481.13 AAA_25 37.8 2.20e-09 85.9% 84.6%
D3 medium residues 378-434
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.81 53.0 5.95e-01 93.0% 88.6%
2bbhA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.72 51.0 3.75e-01 93.0% 28.5%
3ly7A01 3.40.50.11830 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.72 51.0 3.66e-01 75.4% 64.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 46.0 4.31e-01 87.7% 53.6%
7x36A01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.71 49.0 2.98e-01 100.0% 12.6%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.70 51.0 3.77e-01 100.0% 30.4%
3bhcA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.69 52.0 4.07e-01 96.5% 38.2%
2g2sA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.68 46.0 4.51e-01 70.2% 65.6%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 52.0 4.67e-01 98.2% 59.5%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 51.0 4.31e-01 86.0% 77.7%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 41.0 4.01e-01 86.0% 55.6%
3d9rB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 56.0 4.31e-01 96.5% 47.4%
3i6eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.65 41.0 3.44e-01 93.0% 35.0%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 48.0 3.88e-01 98.2% 41.2%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 50.0 4.33e-01 86.0% 82.4%
3ulpD00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 48.0 3.94e-01 86.0% 77.9%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 38.0 3.66e-01 80.7% 51.5%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 47.0 3.85e-01 84.2% 73.0%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 46.0 3.84e-01 86.0% 76.4%
1a6aB01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.61 42.0 3.68e-01 73.7% 79.8%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.61 51.0 4.13e-01 100.0% 51.6%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.60 48.0 3.89e-01 98.2% 45.1%
2pgeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 42.0 3.30e-01 91.2% 33.9%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 44.0 3.63e-01 98.2% 40.8%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.59 40.0 3.96e-01 75.4% 72.3%
3i1iB01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 45.0 2.77e-01 86.0% 29.4%
7jvhC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 46.0 2.90e-01 91.2% 20.4%
1nhpA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.58 46.0 3.73e-01 98.2% 45.1%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.57 39.0 3.74e-01 89.5% 60.6%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 40.0 3.80e-01 94.7% 62.0%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 45.0 3.54e-01 98.2% 39.9%
2w3sB04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.56 46.0 3.29e-01 100.0% 68.1%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 34.0 3.24e-01 80.7% 47.2%
1lj5A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 47.0 3.50e-01 100.0% 63.6%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 38.0 3.27e-01 87.7% 42.7%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.54 43.0 3.55e-01 93.0% 46.0%
1t6eX01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.54 43.0 3.15e-01 91.2% 75.9%
6d92A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 40.0 2.73e-01 82.5% 22.5%
7s7rA01 2.60.40.2860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 39.0 3.02e-01 80.7% 66.4%
2uvaG08 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 2.62e-01 84.2% 42.3%
1rerA01 2.60.98.10 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 0.53 43.0 3.54e-01 100.0% 65.9%
4l8nA03 3.30.160.670 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 44.0 3.31e-01 100.0% 64.6%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.53 45.0 3.03e-01 100.0% 25.2%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 38.0 3.64e-01 96.5% 63.5%
2hb0A01 2.60.40.2520 Mainly Beta › Sandwich › Immunoglobulin-like › CFA/I fimbrial subunit E, adhesin domain 0.53 46.0 3.28e-01 100.0% 47.5%
3cgbA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.53 42.0 3.53e-01 94.7% 48.2%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 40.0 3.79e-01 98.2% 68.1%
3rtyB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 38.0 3.10e-01 80.7% 44.0%
2oc3A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 44.0 2.80e-01 96.5% 19.7%
5hc2B00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 43.0 2.63e-01 94.7% 21.3%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.51 43.0 2.70e-01 100.0% 18.7%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 41.0 3.20e-01 89.5% 58.7%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4779411 243.3.1.6 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Monellin 0.81 54.0 5.99e-01 71.9% 88.6%
3462090 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.76 56.0 3.36e-01 100.0% 12.2%
3827726 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.71 54.0 3.39e-01 100.0% 15.9%
3570251 5.1.4.288 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N 0.69 57.0 3.39e-01 94.7% 15.1%
3731226 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.68 57.0 4.25e-01 96.5% 48.0%
3749122 5.1.3.176 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › APEH_N 0.68 57.0 3.44e-01 96.5% 16.2%
4942589 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.67 42.0 3.94e-01 86.0% 51.4%
4193401 243.1.1.34 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like 0.67 54.0 4.39e-01 100.0% 47.3%
3858387 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 58.0 3.23e-01 100.0% 94.0%
4416182 241.15.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.66 51.0 4.16e-01 100.0% 44.8%
3452042 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.66 53.0 5.40e-01 89.5% 100.0%
3647546 4.26.1.0 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.65 54.0 5.50e-01 91.2% 100.0%
4068016 2.1.1.122 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.65 50.0 4.17e-01 86.0% 80.0%
3370941 295.1.1.35 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FBA_1 0.65 51.0 3.71e-01 100.0% 30.3%
3924081 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.65 49.0 3.78e-01 84.2% 62.9%
3822745 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 49.0 3.85e-01 96.5% 38.4%
3958652 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 48.0 3.38e-01 89.5% 24.9%
3440964 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.64 50.0 3.16e-01 100.0% 15.9%
3427602 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.64 51.0 3.19e-01 100.0% 16.2%
4025160 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.63 48.0 3.84e-01 86.0% 73.6%
3958443 2484.1.1.108 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_assoc 0.63 47.0 3.26e-01 89.5% 23.6%
3174442 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 46.0 3.06e-01 100.0% 18.1%
3750522 4.1.1.218 ↗ beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N 0.62 39.0 3.16e-01 80.7% 31.8%
3956383 2003.1.5.378 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF2332 0.62 55.0 3.64e-01 100.0% 90.6%
3176281 896.1.1.3 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.62 44.0 4.08e-01 94.7% 58.7%
3824181 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.62 53.0 5.29e-01 100.0% 95.0%
3284646 2003.1.5.151 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.61 47.0 3.13e-01 100.0% 19.6%
4608992 243.1.1.1 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.60 47.0 3.55e-01 91.2% 39.2%
3538024 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.60 52.0 3.24e-01 100.0% 17.2%
4511768 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.60 52.0 3.24e-01 100.0% 17.2%
5049449 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 35.0 3.73e-01 80.7% 64.0%
3701914 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 48.0 4.12e-01 91.2% 77.9%
3913149 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.59 53.0 3.89e-01 100.0% 72.7%
3614906 4.26.1.8 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Saf4_Yju2 0.59 42.0 4.01e-01 89.5% 61.4%
3361969 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.59 51.0 3.25e-01 98.2% 31.9%
3738467 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.59 42.0 3.17e-01 87.7% 29.3%
3617912 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.59 48.0 3.84e-01 91.2% 45.0%
4931072 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.59 37.0 3.47e-01 91.2% 50.0%
3802832 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.59 48.0 3.05e-01 96.5% 26.2%
3832543 7516.1.1.41 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase 0.59 48.0 2.68e-01 93.0% 18.5%
5018717 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 38.0 3.85e-01 80.7% 69.1%
4193845 5.1.4.279 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF26550 0.58 50.0 3.13e-01 100.0% 40.8%
4862964 3675.1.1.1 ↗ a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.58 47.0 3.34e-01 98.2% 28.3%
3490141 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.58 51.0 3.78e-01 100.0% 75.2%
3323788 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.58 49.0 3.14e-01 98.2% 33.8%
3210938 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 41.0 3.71e-01 75.4% 97.5%
3397367 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.57 49.0 3.61e-01 100.0% 37.0%
119245 252.3.1.1 ↗ a+b two layers › DNA-binding domain › Uncharacterized protein yaiA › Uncharacterized protein yaiA › YaiA 0.57 39.0 3.74e-01 89.5% 60.6%
3891434 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.56 46.0 3.49e-01 91.2% 43.6%
3596328 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.56 48.0 3.46e-01 100.0% 32.9%
3924799 2484.1.1.107 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1595 0.55 43.0 3.10e-01 87.7% 30.0%
3347601 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.55 44.0 3.29e-01 91.2% 39.4%
3666058 2.1.1.44 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.55 40.0 3.44e-01 89.5% 47.4%
3892129 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.55 44.0 3.40e-01 91.2% 43.6%
5047088 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.55 50.0 3.29e-01 100.0% 33.6%
3634173 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.55 46.0 3.41e-01 96.5% 60.0%
5013086 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.54 39.0 2.80e-01 82.5% 22.9%
294 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.54 41.0 3.18e-01 86.0% 60.7%
3890886 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 45.0 4.12e-01 100.0% 78.8%
4047090 222.1.1.24 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › AfsA 0.52 44.0 3.40e-01 100.0% 69.3%
3815957 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.51 41.0 2.68e-01 98.2% 18.1%
4043415 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 41.0 2.45e-01 93.0% 50.9%
5021438 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 38.0 3.32e-01 100.0% 51.0%
3852230 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.50 37.0 2.32e-01 87.7% 81.5%