AP011617.1BAK53742.1TMA_054__00054

Bact-Vir

AP011617.1__BAK53742.1__TMA_054__00054

Identity

96.5 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Thermus_phage_TMA

TaxID: 699370

View cluster (6 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-20_119-222

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ddhA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.69	46.0	5.46e-01	70.6%	100.0%
3djbA01	1.10.472.50	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like	0.60	39.0	4.31e-01	70.6%	83.3%
5ux1D00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.58	40.0	3.44e-01	70.6%	62.9%
2oxlA00	1.20.5.5260	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.56	31.0	3.99e-01	86.6%	100.0%
4f0uA00	1.10.490.20	Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins	0.51	39.0	3.50e-01	79.0%	99.4%
2btdA00	1.25.40.340	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain	0.51	44.0	3.72e-01	97.5%	89.5%
2oifB00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.50	42.0	3.90e-01	89.9%	95.4%
1kblA05	1.20.80.30	Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein ›	0.50	36.0	4.04e-01	83.2%	100.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5053119	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.57	30.0	3.07e-01	79.0%	50.0%
3408417	2006.1.1.44 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like	0.53	35.0	2.80e-01	100.0%	32.0%
3606961	5067.1.1.0 ↗	alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain	0.52	37.0	3.54e-01	75.6%	84.8%
3590809	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.51	42.0	3.35e-01	87.4%	98.3%

D2 high residues 24-118

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6ne6A01	1.10.400.10	Mainly Alpha › Orthogonal Bundle › GI Alpha 1, domain 2-like › GI Alpha 1, domain 2-like	0.62	48.0	4.51e-01	92.6%	68.4%
7oiyA01	3.90.70.130	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A ›	0.53	38.0	2.94e-01	76.8%	59.2%
2of5H00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.52	43.0	4.28e-01	94.7%	88.0%
2gscC00	1.20.1440.60	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence	0.52	41.0	3.96e-01	94.7%	74.5%
2ff4A02	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.52	38.0	3.14e-01	78.9%	72.5%
6lcuA02	1.10.10.470	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4	0.50	38.0	3.68e-01	80.0%	99.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1125597	235.1.1.8 ↗	a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_46	0.78	67.0	4.82e-01	100.0%	34.8%
3193435	3755.3.1.451 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › BUD22	0.54	39.0	3.49e-01	74.7%	89.6%