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AP011617.1__BAK53756.1__TMA_068__00068

Bact-Vir

AP011617.1__BAK53756.1__TMA_068__00068

Identity

Accession:
AP011617 ↗
Kingdom:
phage

Quality

84.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thermus_phage_TMA

TaxID: 699370

Cluster

View cluster (49 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-90_340-486
PDB
Domain cluster: rep: IMGVR_UViG_648028040_000001-648028040-648194435__D26-229
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3foaB01 3.40.50.11780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.79 76.0 7.28e-01 100.0% 89.5%
4y9tA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 40.0 4.60e-01 100.0% 78.6%
5tdeA03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.64 52.0 5.40e-01 96.5% 89.9%
5t3uB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.62 35.0 4.16e-01 100.0% 81.2%
2jl1A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 46.0 4.89e-01 98.0% 88.9%
1adoA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 52.0 4.22e-01 89.4% 75.5%
1db3A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 53.0 5.11e-01 97.5% 83.1%
4lflA00 3.40.1400.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribose 5-phosphate Isomerase B; Chain: A, › Sugar-phosphate isomerase, RpiB/LacA/LacB 0.59 37.0 4.26e-01 98.0% 85.2%
4q9aA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.59 54.0 5.26e-01 99.0% 94.1%
1xg5B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 55.0 5.11e-01 100.0% 88.9%
6nbrC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 54.0 4.64e-01 100.0% 74.8%
3ksuB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 54.0 5.24e-01 100.0% 89.7%
6ln0A01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.58 39.0 4.30e-01 76.4% 82.1%
4h41B00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 52.0 4.41e-01 96.5% 72.7%
4xvhA02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.58 53.0 5.11e-01 100.0% 97.3%
2pljA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.57 45.0 4.32e-01 81.4% 79.0%
5kmpB00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.57 39.0 3.14e-01 83.4% 34.7%
3wj7A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 53.0 4.42e-01 99.0% 65.5%
4tqgA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 51.0 4.47e-01 99.0% 65.0%
2fiqA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 52.0 4.58e-01 99.0% 84.2%
1yd9B00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.56 43.0 4.48e-01 78.4% 84.0%
3u37A02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.56 52.0 4.80e-01 99.5% 96.0%
3ejfA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.56 38.0 4.13e-01 77.9% 81.9%
7toiA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.56 51.0 5.02e-01 100.0% 94.0%
3l5aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 51.0 4.11e-01 99.5% 82.9%
1hkvA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.55 47.0 4.33e-01 91.0% 74.3%
1pbgA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 51.0 3.89e-01 99.5% 95.8%
3rcyA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.55 41.0 3.82e-01 77.4% 82.7%
1rvkA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.55 42.0 3.83e-01 78.9% 73.5%
1knvB00 3.40.91.10 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.55 48.0 4.24e-01 95.0% 91.8%
4f6cB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 50.0 4.09e-01 100.0% 64.7%
1jphA00 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.54 49.0 4.07e-01 99.0% 91.3%
3qxbA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.54 50.0 4.34e-01 100.0% 86.2%
8d88A01 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.53 46.0 4.22e-01 91.0% 73.6%
5jipA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 48.0 4.63e-01 100.0% 93.0%
1lt7B00 3.20.20.330 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain 0.53 46.0 3.90e-01 92.0% 81.3%
3qvsA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 49.0 4.26e-01 100.0% 99.3%
2qiwA01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.52 44.0 4.22e-01 89.9% 88.1%
3ayvD00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.52 47.0 4.45e-01 99.0% 95.9%
1gw1A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 47.0 3.85e-01 100.0% 81.1%
7y11A01 3.40.525.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain 0.51 41.0 4.14e-01 84.9% 84.5%
4rhaA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.51 33.0 3.89e-01 79.9% 97.7%
3tc3B00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.50 46.0 4.06e-01 100.0% 98.3%
6arhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.50 46.0 4.01e-01 99.5% 74.3%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5060661 2499.2.1.1 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 0.86 73.0 6.62e-01 100.0% 68.8%
3164915 3019.1.1.11 ↗ beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_1 0.83 68.0 6.50e-01 100.0% 74.7%
4988098 2499.2.1.0 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 0.81 64.0 6.02e-01 100.0% 68.5%
3948874 2499.2.1.6 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 0.78 61.0 5.70e-01 100.0% 67.1%
4889794 2499.2.1.1 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 0.66 61.0 5.84e-01 95.5% 86.9%
3568403 2007.5.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SASA 0.64 59.0 5.22e-01 100.0% 97.2%
5067989 2003.1.1.72 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd 0.61 56.0 4.75e-01 99.0% 72.8%
3282283 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.60 55.0 4.74e-01 100.0% 71.0%
4630324 2002.1.1.127 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,LIAS_N 0.59 50.0 4.19e-01 91.5% 80.9%
3206982 2003.1.1.67 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 0.58 54.0 4.89e-01 100.0% 91.3%
3711011 2004.1.1.133 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHD3_GTPase 0.58 52.0 4.48e-01 97.5% 89.5%
3967038 2002.1.1.101 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.58 46.0 4.26e-01 81.9% 79.6%
4011439 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.58 53.0 4.98e-01 100.0% 89.3%
195796 2002.1.1.101 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.57 45.0 4.31e-01 81.4% 78.7%
5011949 2003.1.1.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.57 53.0 5.07e-01 100.0% 90.4%
3805332 2004.1.1.164 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.57 52.0 5.10e-01 100.0% 91.8%
3424824 7529.1.1.3 ↗ a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.57 43.0 4.35e-01 77.9% 82.0%
169938 7529.1.1.1 ↗ a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.56 39.0 4.10e-01 77.9% 77.4%
4546108 2003.1.1.67 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 0.56 52.0 4.73e-01 100.0% 80.8%
3824568 129.1.1.107 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_10 0.56 52.0 4.67e-01 100.0% 79.3%
3270367 2002.1.1.101 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.55 47.0 4.36e-01 91.0% 74.8%
2849646 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.55 46.0 4.08e-01 89.9% 94.1%
3542185 2007.5.1.21 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › NXPE4_C 0.55 50.0 4.22e-01 99.0% 60.8%
4031001 2003.1.3.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_3 0.54 32.0 2.64e-01 82.9% 31.4%
3778417 2007.5.1.21 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › NXPE4_C 0.54 49.0 4.26e-01 100.0% 65.0%
149562 2008.1.1.26 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Bse634I 0.54 48.0 4.20e-01 94.5% 91.7%
4931812 2002.1.1.60 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.54 49.0 4.50e-01 99.5% 94.7%
3249391 246.2.1.7 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.54 41.0 3.49e-01 78.4% 70.6%
3613387 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.53 48.0 4.53e-01 100.0% 89.9%
3758777 246.2.1.0 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.53 40.0 3.12e-01 77.9% 54.3%
3214210 246.2.1.7 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.53 40.0 3.46e-01 78.4% 78.1%
3189981 2002.1.1.57 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D 0.52 47.0 3.85e-01 97.0% 91.2%
4453338 2002.1.1.205 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,CofH_C 0.52 48.0 3.89e-01 100.0% 69.2%
431437 2002.1.1.60 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.52 47.0 4.45e-01 99.0% 95.9%
3719318 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.52 47.0 4.63e-01 100.0% 93.6%
3335717 2003.1.5.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ 0.52 44.0 4.45e-01 97.0% 91.3%
2878231 2002.1.1.60 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.51 47.0 4.19e-01 100.0% 96.9%
5026485 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.51 46.0 3.98e-01 97.5% 83.5%
3382359 300.1.1.16 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 0.51 44.0 3.61e-01 91.0% 72.7%
3933563 7579.1.1.71 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DDHD 0.51 47.0 4.13e-01 99.0% 97.6%
3496243 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.51 43.0 3.59e-01 90.5% 73.7%
3667975 300.1.1.16 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 0.51 41.0 4.16e-01 92.0% 86.1%
4234094 2007.2.1.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_2 0.51 45.0 4.49e-01 97.5% 97.6%
3619704 300.1.1.1 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc 0.50 43.0 3.54e-01 90.5% 73.4%
3494448 300.1.1.1 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc 0.50 43.0 3.90e-01 90.5% 84.6%
3614992 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.50 45.0 3.58e-01 98.5% 81.7%
D2 high residues 556-647
PDB
Domain cluster: rep: BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00084__D122-225
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17482.8 best Phage_sheath_1C 27.6 3.40e-06 96.7% 89.4%
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kojB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 39.0 3.94e-01 95.7% 53.3%
5cxoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 51.0 4.54e-01 75.0% 79.1%
5ig0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 50.0 4.43e-01 72.8% 80.2%
3cnxA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 49.0 4.32e-01 72.8% 86.2%
3rgaA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 50.0 4.45e-01 76.1% 80.5%
1s5aB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 49.0 4.26e-01 73.9% 79.7%
2b1xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 48.0 3.98e-01 73.9% 80.8%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 47.0 3.78e-01 71.7% 78.0%
3bb9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 46.0 4.17e-01 70.7% 84.8%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 48.0 4.15e-01 73.9% 70.7%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.67 42.0 4.85e-01 78.3% 95.0%
3ff0A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 47.0 4.08e-01 73.9% 78.7%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 47.0 4.08e-01 75.0% 78.9%
3ff2A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 46.0 4.24e-01 72.8% 88.9%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 42.0 4.71e-01 93.5% 87.0%
8evkA01 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.64 44.0 4.20e-01 78.3% 60.2%
3obaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 47.0 3.26e-01 76.1% 40.3%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.64 52.0 4.25e-01 98.9% 47.6%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 43.0 3.99e-01 71.7% 81.3%
2r4iA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 43.0 3.94e-01 70.7% 83.7%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.61 44.0 3.72e-01 77.2% 56.4%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 35.0 3.47e-01 98.9% 52.5%
4j8tA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 47.0 4.16e-01 80.4% 82.0%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 35.0 3.54e-01 95.7% 56.0%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 45.0 3.97e-01 91.3% 52.9%
6eugA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 43.0 2.89e-01 73.9% 27.1%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 43.0 2.96e-01 73.9% 30.4%
1zhhB01 3.30.450.220 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › LuxQ periplasmic domain, N-terminal subdomain 0.60 48.0 4.05e-01 87.0% 89.8%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.60 46.0 3.94e-01 100.0% 51.0%
1w0pA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.59 43.0 2.83e-01 75.0% 27.1%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.59 43.0 3.57e-01 78.3% 55.9%
2yh6D00 3.30.530.50 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.57 38.0 3.66e-01 98.9% 57.3%
2b5lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 39.0 2.62e-01 71.7% 31.4%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 3.85e-01 80.4% 83.5%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.56 44.0 2.91e-01 85.9% 96.6%
2nlvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.56 39.0 3.71e-01 73.9% 61.6%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 3.95e-01 77.2% 75.0%
4cvuA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 47.0 4.36e-01 95.7% 96.6%
7prrB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 48.0 3.97e-01 100.0% 91.1%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 36.0 3.30e-01 91.3% 51.2%
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.54 40.0 3.84e-01 97.8% 65.8%
1rm6D04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.53 46.0 3.48e-01 100.0% 87.3%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 38.0 3.30e-01 78.3% 80.9%
2i99A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.52 35.0 2.99e-01 98.9% 42.0%
3obqA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.52 36.0 3.18e-01 71.7% 70.9%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.52 39.0 3.27e-01 88.0% 46.8%
3uoaB02 2.60.40.3360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 45.0 4.01e-01 100.0% 83.8%
2zf3C00 2.50.20.30 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.51 37.0 3.01e-01 76.1% 56.0%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.50 41.0 3.70e-01 91.3% 81.2%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 43.0 3.35e-01 100.0% 50.6%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.50 40.0 3.28e-01 84.8% 72.4%
4iykA02 2.60.40.2060 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 42.0 3.88e-01 92.4% 96.6%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 37.0 3.31e-01 92.4% 55.6%
1w7cA03 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 34.0 3.26e-01 71.7% 68.7%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4968521 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.74 62.0 6.34e-01 100.0% 95.5%
3622132 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.73 51.0 4.39e-01 71.7% 77.9%
3692485 243.1.1.87 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_SigF 0.73 51.0 4.27e-01 72.8% 69.8%
5061773 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.73 60.0 6.24e-01 97.8% 100.0%
4995812 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.72 64.0 6.30e-01 100.0% 98.0%
1688901 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.71 51.0 4.54e-01 75.0% 82.8%
4954004 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.70 63.0 5.89e-01 100.0% 88.7%
4999946 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.69 55.0 5.71e-01 100.0% 96.5%
4957500 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.68 60.0 6.03e-01 98.9% 96.8%
3700323 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 38.0 4.87e-01 100.0% 96.4%
3256136 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.67 47.0 3.99e-01 73.9% 72.9%
4022036 243.1.1.87 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_SigF 0.66 50.0 3.95e-01 79.3% 65.6%
3482245 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.66 47.0 4.00e-01 73.9% 88.7%
5000965 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.66 48.0 4.85e-01 77.2% 77.8%
3716605 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.65 56.0 4.64e-01 94.6% 61.9%
3696055 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.64 44.0 3.89e-01 70.7% 77.0%
3600656 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.63 54.0 3.65e-01 97.8% 27.7%
3418966 5.1.4.32 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.63 44.0 2.79e-01 72.8% 23.5%
2724186 243.1.1.67 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C 0.61 43.0 3.99e-01 72.8% 83.3%
3998954 223.2.1.37 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like 0.61 46.0 4.17e-01 93.5% 57.7%
3407011 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 46.0 3.76e-01 84.8% 42.9%
3819014 243.3.1.47 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF7074 0.61 43.0 4.51e-01 75.0% 82.1%
5023738 11.1.1.1443 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29994 0.61 50.0 4.75e-01 91.3% 90.9%
3809890 331.3.1.28 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF220 0.61 48.0 3.59e-01 90.2% 34.4%
3281948 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.60 45.0 4.16e-01 80.4% 87.5%
5045702 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.59 52.0 3.87e-01 100.0% 82.8%
3230100 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 34.0 4.25e-01 89.1% 96.4%
5036880 330.1.1.35 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › LeuA_dimer 0.59 34.0 3.86e-01 98.9% 75.7%
5018714 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 36.0 4.34e-01 100.0% 95.0%
3345244 5.1.8.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › FBA_1 0.59 41.0 3.50e-01 71.7% 56.6%
3996695 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.58 33.0 4.06e-01 94.6% 92.7%
5046132 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.58 49.0 3.66e-01 96.7% 77.6%
3593049 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 46.0 3.56e-01 90.2% 38.1%
3701306 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.57 46.0 3.51e-01 90.2% 38.1%
4977257 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.57 49.0 3.67e-01 98.9% 82.0%
3584922 5.1.4.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.56 40.0 2.94e-01 73.9% 32.0%
3961157 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.56 39.0 3.62e-01 92.4% 55.8%
4137219 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.56 31.0 3.10e-01 100.0% 48.0%
4962576 3692.1.1.1 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.56 36.0 3.12e-01 98.9% 42.1%
2388815 5.1.4.292 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CAF1C_H4-bd, Beta-prop_EIPR1 0.55 34.0 3.53e-01 81.5% 66.3%
3301049 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.55 43.0 4.04e-01 98.9% 67.5%
4934627 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 38.0 3.65e-01 73.9% 79.1%
5082512 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 34.0 3.23e-01 100.0% 52.7%
3797033 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.55 45.0 3.87e-01 92.4% 65.8%
3502994 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.54 45.0 4.02e-01 91.3% 74.6%
4675848 9.2.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin 0.54 43.0 3.82e-01 88.0% 77.7%
3876143 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.54 35.0 3.11e-01 92.4% 45.2%
5068436 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 47.0 3.50e-01 97.8% 69.4%
3599605 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.53 47.0 3.39e-01 97.8% 55.6%
4541284 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 37.0 3.49e-01 73.9% 82.5%
3789178 5.1.2.20 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BMT 0.53 41.0 2.55e-01 82.6% 27.5%
3871082 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.53 35.0 2.97e-01 92.4% 41.3%
4096366 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 46.0 4.21e-01 98.9% 84.8%
4169235 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 45.0 4.14e-01 95.7% 81.3%
3173646 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.52 40.0 3.26e-01 93.5% 44.8%
3414096 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.52 34.0 3.03e-01 91.3% 46.9%
5006022 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.52 43.0 3.66e-01 100.0% 54.0%
3541262 11.1.1.640 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.51 44.0 4.28e-01 93.5% 92.0%
3569641 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 4.36e-01 94.6% 97.9%
3572164 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 45.0 4.50e-01 98.9% 100.0%
D3 medium residues 92-170_251-261_306-339
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hxlA02 2.60.40.4290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.79 56.0 6.58e-01 95.2% 100.0%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 28.0 3.63e-01 71.0% 90.8%
3jvgA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.54 41.0 3.69e-01 79.0% 86.7%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 28.0 3.20e-01 71.0% 68.9%
4jhmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 32.0 3.31e-01 70.2% 65.0%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.50 39.0 3.81e-01 83.1% 74.5%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995821 3629.1.1.0 ↗ beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain 0.66 59.0 5.36e-01 95.2% 100.0%
4943345 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 34.0 3.75e-01 71.8% 68.0%
5004589 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.55 36.0 3.83e-01 75.0% 73.6%
4593266 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.54 29.0 3.51e-01 73.4% 81.3%
5081617 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 38.0 2.73e-01 71.8% 39.4%
3714021 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.53 39.0 2.76e-01 76.6% 75.9%
3858981 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.52 29.0 3.65e-01 70.2% 94.3%
3284644 243.1.1.71 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF8176 0.52 33.0 3.35e-01 77.4% 63.2%
4980165 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 39.0 2.69e-01 79.8% 99.3%
4017019 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.51 35.0 3.07e-01 70.2% 80.0%
3342794 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.50 32.0 3.63e-01 74.2% 87.8%
D4 medium residues 171-250_262-305
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vajA02 3.30.1490.150 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Hypothetical protein ph0010; domain 2 0.58 29.0 3.60e-01 81.5% 77.0%
3t91B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.56 37.0 3.08e-01 99.2% 37.4%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.53 37.0 3.08e-01 72.6% 61.9%
2j82A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.50 45.0 3.75e-01 100.0% 88.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3286797 304.154.1.0 ↗ a+b two layers › Alpha-beta plaits › Regulator of polyketide synthase expression N-terminal domain › Regulator of polyketide synthase expression N-terminal domain 0.50 43.0 4.03e-01 93.5% 94.8%
D5 medium residues 487-537
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k4qA00 4.10.410.40 Few Secondary Structures › Irregular › Factor Xa Inhibitor › 0.64 46.0 3.35e-01 80.4% 62.2%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 40.0 2.95e-01 84.3% 86.5%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.54 43.0 3.98e-01 98.0% 68.7%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 45.0 2.95e-01 100.0% 88.6%
6lcqA00 3.30.30.10 Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like 0.53 41.0 4.09e-01 92.2% 81.5%
7sxqA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 37.0 2.46e-01 78.4% 69.8%
3cuqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 3.71e-01 94.1% 73.8%
1vknA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 39.0 3.00e-01 100.0% 98.2%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 37.0 2.60e-01 86.3% 89.7%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4991835 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 50.0 5.13e-01 90.2% 88.0%
3605661 2007.2.3.9 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase 0.61 46.0 2.77e-01 82.4% 40.8%
5029523 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.60 32.0 3.33e-01 78.4% 56.2%
3267853 4081.1.1.2 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.59 48.0 3.28e-01 100.0% 46.4%
4542856 2003.1.5.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.56 45.0 2.67e-01 90.2% 18.0%
3834564 387.1.5.15 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SLR1-BP 0.56 44.0 4.47e-01 92.2% 87.8%
5064876 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.53 36.0 2.71e-01 70.6% 61.3%
2604944 387.1.5.1 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Gamma-thionin 0.53 41.0 4.09e-01 92.2% 81.5%
3969012 101.1.2.485 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF2513 0.52 44.0 3.72e-01 98.0% 55.6%
4944813 101.1.2.819 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27231 0.52 35.0 2.44e-01 70.6% 49.7%
5010299 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.52 31.0 3.15e-01 78.4% 56.0%
5059322 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.51 38.0 2.88e-01 88.2% 78.7%
4988160 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.51 40.0 3.72e-01 100.0% 69.2%