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AP011617.1__BAK53825.1__TMA_137__00137

Bact-Vir

AP011617.1__BAK53825.1__TMA_137__00137

Identity

Accession:
AP011617 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thermus_phage_TMA

TaxID: 699370

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 183-245
PDB
Domain cluster: rep: NC_031022.1__YP_009280252.1__BI056_gp065__00065__D70-126
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2d7vB00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.65 51.0 3.90e-01 87.3% 47.7%
1b8gA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 53.0 4.03e-01 100.0% 62.2%
3t4nA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.62 49.0 4.29e-01 87.3% 87.5%
1s68A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.62 48.0 4.00e-01 85.7% 65.5%
2yrrA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 53.0 4.45e-01 100.0% 88.3%
2qv8A00 3.55.40.10 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain 0.61 50.0 3.83e-01 90.5% 40.3%
3sqfA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.61 41.0 3.65e-01 71.4% 96.8%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 47.0 3.78e-01 88.9% 82.9%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.58 40.0 4.47e-01 73.0% 93.8%
2e7jA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 49.0 4.18e-01 100.0% 90.2%
1svvB02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 48.0 4.30e-01 95.2% 95.7%
4qmaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 44.0 3.41e-01 84.1% 84.6%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 42.0 3.44e-01 79.4% 78.2%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 39.0 3.98e-01 71.4% 87.1%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 43.0 3.96e-01 85.7% 63.5%
4hc5D00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 44.0 3.55e-01 88.9% 85.5%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.56 43.0 4.19e-01 85.7% 98.6%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 41.0 3.79e-01 81.0% 80.2%
4hh3A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 42.0 3.56e-01 84.1% 80.7%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.55 38.0 4.06e-01 74.6% 96.0%
1nhyA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 42.0 3.99e-01 87.3% 85.7%
3rheA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 36.0 3.10e-01 73.0% 39.5%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 44.0 3.02e-01 100.0% 56.9%
3ss3C02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.54 45.0 2.91e-01 96.8% 44.1%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 41.0 3.43e-01 90.5% 79.5%
1t3aA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.53 48.0 2.92e-01 100.0% 62.3%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 38.0 3.72e-01 73.0% 80.6%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 42.0 3.67e-01 85.7% 92.6%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.53 39.0 3.82e-01 82.5% 86.1%
3ab1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 38.0 3.13e-01 79.4% 89.7%
2uz8A01 3.40.30.90 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.52 40.0 4.20e-01 88.9% 100.0%
7r71A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 38.0 3.79e-01 77.8% 98.4%
1xf1A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.42e-01 84.1% 90.1%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 42.0 2.84e-01 98.4% 27.1%
1cjxA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 36.0 2.84e-01 76.2% 37.3%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.51 39.0 3.43e-01 84.1% 78.4%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.51 39.0 3.54e-01 85.7% 86.7%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 41.0 3.48e-01 87.3% 94.2%
3lm4A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 36.0 2.93e-01 79.4% 36.0%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 35.0 3.47e-01 74.6% 90.1%
4p79A00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.51 40.0 3.03e-01 93.7% 69.1%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.50 42.0 2.71e-01 95.2% 31.5%
3gasA01 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.50 36.0 3.43e-01 79.4% 96.2%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081654 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.82 64.0 6.57e-01 85.7% 88.3%
4679970 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.67 41.0 3.41e-01 85.7% 37.1%
5073123 2008.5.1.1 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Uncharacterized protein AF_2093 C-terminal domain › Uncharacterized protein AF_2093 C-terminal domain › DUF6834_C 0.67 55.0 4.31e-01 93.7% 85.0%
3520270 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.64 39.0 3.31e-01 85.7% 37.1%
4683204 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.63 39.0 3.26e-01 85.7% 37.1%
3603680 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.61 47.0 4.17e-01 85.7% 100.0%
3588447 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.61 46.0 3.21e-01 85.7% 90.0%
3567156 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.61 48.0 3.29e-01 85.7% 63.1%
3723441 7502.1.1.7 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 0.59 48.0 3.98e-01 92.1% 69.2%
3388541 241.4.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.59 47.0 4.24e-01 93.7% 91.6%
4120629 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 43.0 4.09e-01 79.4% 82.7%
3289062 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 47.0 4.22e-01 88.9% 75.6%
3901419 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.58 42.0 2.89e-01 79.4% 25.1%
3764706 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.57 41.0 2.88e-01 81.0% 24.4%
5023929 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 43.0 3.95e-01 82.5% 76.5%
3310407 386.1.1.117 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.57 41.0 4.45e-01 81.0% 100.0%
3656139 64.1.1.8 ↗ beta meanders › WW domain-like › WW domain › WW domain › DUF7028 0.56 44.0 4.49e-01 90.5% 96.7%
6331 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 43.0 3.53e-01 90.5% 78.9%
4246959 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.55 38.0 3.11e-01 71.4% 91.2%
3804264 64.1.1.8 ↗ beta meanders › WW domain-like › WW domain › WW domain › DUF7028 0.55 42.0 3.92e-01 90.5% 64.7%
5031165 4.1.1.93 ↗ beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.55 42.0 4.08e-01 84.1% 100.0%
3953524 378.1.1.23 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF222 0.55 39.0 3.08e-01 79.4% 55.5%
3601033 77.2.1.0 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.55 41.0 3.22e-01 82.5% 49.0%
3604573 5.1.4.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.55 42.0 2.43e-01 85.7% 10.5%
4982692 218.4.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.54 44.0 3.64e-01 90.5% 92.2%
5012656 330.5.1.0 ↗ a+b two layers › dsRBD-like › Bacillus phage protein › Bacillus phage protein 0.54 45.0 4.20e-01 98.4% 85.9%
3957069 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.54 39.0 3.03e-01 79.4% 53.8%
1031172 4.1.1.113 ↗ beta barrels › SH3 › SH3 › SH3 › TraI_2B 0.54 42.0 4.04e-01 85.7% 86.1%
4492949 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.54 39.0 3.41e-01 79.4% 81.9%
4205711 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.54 41.0 3.14e-01 82.5% 63.9%
5043802 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 36.0 3.10e-01 71.4% 54.8%
3657220 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.54 42.0 2.59e-01 87.3% 37.5%
3926167 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.54 44.0 2.98e-01 93.7% 86.9%
3356481 386.1.1.117 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.54 42.0 3.95e-01 92.1% 71.1%
3939634 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.54 41.0 3.47e-01 85.7% 74.8%
4532614 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.53 38.0 3.76e-01 73.0% 87.7%
None — 0.53 41.0 2.55e-01 87.3% 38.1%
4593997 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.89e-01 79.4% 100.0%
3687406 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 39.0 3.66e-01 84.1% 95.2%
4661064 252.1.1.1 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.53 36.0 3.70e-01 81.0% 76.3%
3377905 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.52 41.0 2.86e-01 87.3% 67.6%
3243143 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 41.0 4.12e-01 90.5% 93.8%
1116809 2.1.1.78 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB 0.52 41.0 3.61e-01 87.3% 91.8%
3942661 620.1.1.2 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB 0.52 46.0 3.47e-01 100.0% 92.9%
3701382 312.1.1.8 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.51 45.0 3.02e-01 100.0% 59.3%
358135 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.51 36.0 3.25e-01 74.6% 52.2%
3277941 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.51 39.0 3.02e-01 85.7% 80.6%
3601275 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 39.0 2.44e-01 87.3% 22.6%
5061404 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.51 42.0 2.82e-01 100.0% 68.2%
3966081 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.51 33.0 3.17e-01 73.0% 53.8%
4998989 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.50 38.0 2.60e-01 85.7% 30.5%
3759086 3016.1.1.21 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › PDXDC1-like_cen 0.50 44.0 3.40e-01 100.0% 100.0%
3536576 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.50 34.0 3.18e-01 73.0% 57.6%
D2 high residues 349-464
PDB
Domain cluster: rep: ON968454.1__UXO93980.1__Pan3_58__00059__D5-101
D3 high residues 468-521
PDB
Domain cluster: rep: gwf1_scaffold_41_prodigal-single.1__X__X__00347__D241-286
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uj8A00 1.10.10.600 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IscX-like 0.50 39.0 3.68e-01 92.6% 72.6%
D4 medium residues 2-102
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3natA01 3.40.50.11250 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 0.50 39.0 3.49e-01 84.2% 99.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4979253 241.9.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF1801 0.63 44.0 4.33e-01 73.3% 98.2%
5035567 331.2.1.1 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.54 29.0 3.44e-01 90.1% 75.4%
D5 medium residues 107-177
PDB
Domain cluster: representative
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3natA01 3.40.50.11250 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 0.74 62.0 4.90e-01 93.0% 72.1%
2fkiA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.73 61.0 5.26e-01 95.8% 89.0%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.72 60.0 5.24e-01 93.0% 85.3%
2pb2B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.71 60.0 4.74e-01 93.0% 64.8%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.70 61.0 5.40e-01 98.6% 89.5%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.68 55.0 4.33e-01 87.3% 78.1%
2z67A00 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.68 54.0 3.33e-01 88.7% 22.6%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.67 56.0 5.39e-01 91.5% 98.7%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.66 45.0 3.96e-01 70.4% 97.1%
2dbcA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 55.0 4.59e-01 98.6% 68.9%
6k8hA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.65 56.0 4.24e-01 98.6% 59.0%
2x3lA01 3.90.1150.150 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.65 52.0 4.60e-01 88.7% 79.0%
3getA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.65 54.0 4.93e-01 93.0% 89.4%
1thxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 53.0 4.69e-01 93.0% 69.4%
2cy8A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.64 56.0 4.16e-01 100.0% 57.1%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 44.0 4.04e-01 70.4% 70.7%
4zm3B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.64 53.0 4.33e-01 95.8% 69.7%
1v2dA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.64 51.0 4.26e-01 91.5% 64.9%
3eleC01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.64 54.0 4.24e-01 98.6% 55.5%
2k6vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 53.0 4.01e-01 93.0% 71.5%
1xmbA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.63 55.0 3.73e-01 100.0% 35.8%
4emyA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.63 53.0 4.10e-01 97.2% 48.2%
2zyqA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 42.0 3.43e-01 73.2% 36.4%
3l44A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 54.0 4.07e-01 100.0% 57.9%
6jy1A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 52.0 4.36e-01 97.2% 63.9%
4s39A02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.62 54.0 4.65e-01 100.0% 87.1%
3fogA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 43.0 3.80e-01 71.8% 97.1%
3asaA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 49.0 4.01e-01 88.7% 64.0%
3b46A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 52.0 4.02e-01 97.2% 66.3%
5i92F01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 51.0 3.95e-01 97.2% 58.0%
6g62A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 51.0 4.37e-01 93.0% 65.2%
1w7lA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 48.0 3.77e-01 88.7% 66.9%
1r9cA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.60 48.0 3.99e-01 87.3% 82.4%
2pptA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 49.0 4.38e-01 93.0% 70.8%
2diyA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 53.0 4.59e-01 98.6% 70.3%
1m5q102 3.30.310.60 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Like-Sm ribonucleoprotein, C-terminal domain 0.60 43.0 4.72e-01 76.1% 96.6%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.60 46.0 4.34e-01 85.9% 90.1%
2epjA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 49.0 3.86e-01 100.0% 61.9%
1xqaA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 47.0 4.08e-01 87.3% 90.0%
2ehbD00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.59 47.0 3.93e-01 88.7% 59.5%
1w66A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.59 51.0 3.72e-01 100.0% 43.8%
3iv4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 47.0 4.08e-01 88.7% 67.0%
5gvcB01 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 44.0 3.45e-01 83.1% 91.4%
3qguA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 46.0 3.82e-01 93.0% 62.5%
1q9uA00 3.30.310.70 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TT1751-like domain 0.58 46.0 3.85e-01 90.1% 85.9%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 31.0 3.43e-01 87.3% 64.9%
1svvB02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 45.0 4.26e-01 93.0% 92.4%
4cw9B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 45.0 4.07e-01 91.5% 67.3%
3rv0B03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 44.0 4.32e-01 91.5% 92.4%
4qt4A00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.55 46.0 3.52e-01 97.2% 86.2%
2mjlA00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.55 45.0 3.38e-01 94.4% 85.8%
3oajA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 41.0 3.35e-01 81.7% 43.8%
4j56E00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 43.0 3.87e-01 88.7% 69.5%
4cgyA01 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 43.0 3.31e-01 88.7% 86.4%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.55 49.0 3.11e-01 100.0% 93.9%
3g12B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 42.0 3.69e-01 87.3% 88.5%
4epkB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.54 42.0 2.80e-01 88.7% 51.2%
1g6sA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.53 41.0 3.02e-01 93.0% 29.9%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.53 39.0 3.66e-01 93.0% 63.3%
3eagA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.52 42.0 3.05e-01 93.0% 83.1%
2mtzA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.52 42.0 3.61e-01 100.0% 54.6%
3d5lB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.65e-01 100.0% 59.8%
2uz8A01 3.40.30.90 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.52 37.0 3.96e-01 90.1% 100.0%
3noyB02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.52 43.0 4.02e-01 98.6% 82.1%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.51 39.0 3.96e-01 84.5% 83.3%
2gnxA02 3.30.450.240 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 38.0 3.39e-01 84.5% 55.0%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 40.0 3.57e-01 90.1% 88.9%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3918694 4099.1.1.10 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.78 68.0 6.34e-01 97.2% 100.0%
2132278 2004.1.1.99 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.71 51.0 3.51e-01 74.6% 40.5%
5045947 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.70 61.0 4.86e-01 98.6% 93.8%
4126343 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.70 49.0 4.16e-01 98.6% 44.2%
2722572 3894.1.1.3 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M 0.69 49.0 3.96e-01 74.6% 68.9%
3697558 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.69 59.0 5.26e-01 98.6% 97.1%
3885316 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.67 55.0 4.31e-01 93.0% 48.8%
4030333 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.67 55.0 4.27e-01 93.0% 49.1%
4939609 2008.5.1.1 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Uncharacterized protein AF_2093 C-terminal domain › Uncharacterized protein AF_2093 C-terminal domain › DUF6834_C 0.66 55.0 4.51e-01 93.0% 83.0%
1693723 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.66 54.0 4.77e-01 93.0% 91.8%
5006738 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.64 55.0 4.44e-01 100.0% 64.9%
5003263 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.64 47.0 3.95e-01 83.1% 45.8%
2841859 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 44.0 4.34e-01 70.4% 100.0%
3529971 327.11.2.18 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like 0.64 46.0 4.48e-01 76.1% 71.2%
4244167 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.64 52.0 4.88e-01 93.0% 94.4%
3623960 3105.1.1.4 ↗ a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 0.63 52.0 3.97e-01 91.5% 76.5%
4562693 2011.1.1.6 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.63 56.0 3.77e-01 100.0% 90.2%
3734074 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.63 46.0 4.64e-01 76.1% 78.6%
4997572 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.63 55.0 4.79e-01 100.0% 93.6%
3458143 331.4.1.2 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.63 48.0 3.92e-01 83.1% 63.0%
3663084 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.63 48.0 3.82e-01 83.1% 71.7%
5026439 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.62 51.0 4.76e-01 93.0% 95.6%
4117857 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.62 48.0 4.20e-01 83.1% 71.4%
2709980 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.62 52.0 4.89e-01 97.2% 93.3%
4484798 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.62 53.0 4.90e-01 98.6% 86.3%
3760199 331.2.1.6 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › Med14_RM8 0.62 49.0 4.45e-01 88.7% 95.0%
3360656 331.4.1.2 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.62 51.0 4.24e-01 100.0% 50.8%
5000991 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.62 53.0 4.45e-01 100.0% 95.4%
4438233 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.61 40.0 3.54e-01 73.2% 44.8%
3663048 331.4.1.2 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.61 51.0 4.32e-01 94.4% 59.2%
4964255 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.60 46.0 3.37e-01 81.7% 52.4%
3179971 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.60 43.0 4.19e-01 76.1% 80.0%
4956650 2008.2.1.1 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo 0.60 48.0 4.33e-01 90.1% 90.0%
4943369 314.1.1.12 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.60 52.0 3.68e-01 100.0% 39.1%
4674297 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.60 50.0 4.64e-01 97.2% 86.3%
4970044 3518.1.1.1 ↗ a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind 0.60 47.0 3.53e-01 84.5% 56.7%
3738504 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.59 49.0 4.28e-01 91.5% 68.2%
4817079 327.11.2.5 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_8 0.59 49.0 4.71e-01 94.4% 86.6%
4302852 331.22.1.2 ↗ a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 0.59 46.0 3.46e-01 85.9% 45.9%
5052686 2003.1.5.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.59 38.0 2.47e-01 84.5% 14.5%
3638648 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.58 46.0 3.86e-01 87.3% 69.6%
141372 2008.2.1.1 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo 0.58 46.0 4.34e-01 90.1% 91.2%
3299630 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.58 46.0 4.08e-01 87.3% 72.4%
3576759 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 45.0 4.61e-01 87.3% 97.1%
3995113 331.4.1.1 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.57 47.0 4.32e-01 91.5% 78.9%
4996248 331.19.1.0 ↗ a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.57 44.0 4.13e-01 84.5% 87.8%
3476001 331.4.1.1 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.57 47.0 4.35e-01 91.5% 76.3%
4323155 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.57 48.0 4.30e-01 93.0% 72.0%
3717071 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.57 47.0 3.05e-01 93.0% 66.8%
4465073 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.57 47.0 4.16e-01 91.5% 67.3%
3592558 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 46.0 4.24e-01 93.0% 88.4%
3169840 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.56 46.0 3.42e-01 93.0% 83.5%
3056509 2007.3.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.56 48.0 3.58e-01 100.0% 51.3%
4315853 2011.2.1.3 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro 0.56 47.0 3.56e-01 100.0% 83.6%
5042462 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.56 40.0 3.08e-01 76.1% 54.5%
3252404 331.4.1.1 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.56 46.0 4.25e-01 93.0% 76.8%
3333293 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.55 45.0 4.42e-01 88.7% 86.7%
None — 0.55 49.0 3.04e-01 100.0% 99.3%
3303185 5.3.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.54 43.0 3.47e-01 93.0% 72.9%
4976626 3714.1.1.0 ↗ a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain 0.54 36.0 2.61e-01 70.4% 32.0%
4414836 2007.1.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.53 45.0 2.76e-01 97.2% 84.0%
3240671 5001.1.1.60 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srx 0.52 43.0 2.92e-01 97.2% 90.7%
1289505 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.52 44.0 2.86e-01 97.2% 97.0%
D6 medium residues 250-318
PDB
Domain cluster: rep: SRR1747052_scaffold_19_prodigal-single.1__X__X__00233__D185-252
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dapA02 3.40.1350.60 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.74 66.0 5.11e-01 100.0% 57.2%
6p4wB01 3.40.91.30 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.71 62.0 5.34e-01 98.6% 66.1%
1hyrC01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.58 40.0 3.04e-01 73.9% 90.6%
4g6vA00 3.40.1350.120 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.57 47.0 3.85e-01 91.3% 70.5%
4oycB00 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.56 40.0 3.71e-01 75.4% 76.4%
4mt1A06 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.55 39.0 3.50e-01 76.8% 75.2%
1kcgC00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.54 39.0 3.07e-01 79.7% 89.4%
2ostD00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.54 46.0 3.81e-01 100.0% 92.5%
1darA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 44.0 3.11e-01 100.0% 29.5%
3dbxA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.53 37.0 2.82e-01 75.4% 55.0%
5ajiB03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 37.0 3.38e-01 76.8% 69.5%
4ylmX00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.51 36.0 2.46e-01 75.4% 53.6%
2dy1A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 2.98e-01 100.0% 39.3%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3163838 2008.1.1.17 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 0.83 76.0 6.34e-01 100.0% 60.9%
3964655 2008.1.1.17 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 0.83 76.0 6.37e-01 100.0% 61.8%
4940595 2008.1.1.14 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr 0.83 74.0 6.52e-01 100.0% 68.0%
5069856 2008.1.1.17 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 0.82 74.0 6.13e-01 97.1% 58.3%
5056125 2008.1.1.14 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr 0.81 74.0 5.94e-01 100.0% 67.7%
4028756 2008.1.1.86 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.81 71.0 5.35e-01 100.0% 41.2%
4026799 2008.1.1.86 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.79 72.0 5.98e-01 100.0% 60.9%
5074968 2008.1.1.122 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII-MboI 0.77 70.0 5.44e-01 100.0% 50.3%
4027449 2008.1.1.86 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.77 70.0 6.04e-01 100.0% 66.7%
4620053 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 68.0 5.05e-01 100.0% 42.3%
4024691 2008.1.1.86 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.76 68.0 6.00e-01 100.0% 68.0%
4030733 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 68.0 5.88e-01 100.0% 66.3%
3594690 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.70 62.0 4.40e-01 100.0% 35.3%
4955102 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 57.0 4.70e-01 100.0% 56.3%
5032035 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 56.0 5.61e-01 95.7% 94.3%
5009348 2008.1.1.108 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 0.63 54.0 4.74e-01 100.0% 64.8%
4972340 2008.2.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like 0.59 48.0 4.96e-01 95.7% 96.9%
3941741 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 46.0 3.81e-01 100.0% 68.6%
3316523 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.55 45.0 3.15e-01 94.2% 49.8%
5005723 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.53 41.0 2.79e-01 100.0% 21.4%
3521727 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.52 37.0 2.86e-01 79.7% 89.2%
3610398 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.50 35.0 3.47e-01 75.4% 81.3%