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AP014629.1__BAP28917.1__X__00046
Bact-VirAP014629.1__BAP28917.1__X__00046
Identity
- Accession:
- AP014629 ↗
- Kingdom:
- phage
Quality
66.2
mean pLDDT
Taxonomy
TaxID: 1537091
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-51
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2be3B01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.67 | 51.0 | 3.63e-01 | 81.6% | 91.9% |
| 2eljA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 42.0 | 3.67e-01 | 83.7% | 85.3% |
| 2vy1A00 | 1.10.4180.10 | Mainly Alpha › Orthogonal Bundle › Protein LEAFY › Protein LEAFY | 0.54 | 42.0 | 2.92e-01 | 85.7% | 83.4% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.51 | 40.0 | 3.34e-01 | 85.7% | 58.8% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3501432 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.78 | 47.0 | 3.56e-01 | 89.8% | 27.3% |
| 3700267 | 601.39.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Enhancer of filamentation 1 › Enhancer of filamentation 1 | 0.76 | 61.0 | 4.30e-01 | 98.0% | 29.7% |
| 4012307 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.72 | 51.0 | 4.54e-01 | 89.8% | 55.4% |
| None | — | 0.62 | 53.0 | 3.08e-01 | 100.0% | 56.0% | |
| 4932544 | 102.2.1.2 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 | 0.60 | 48.0 | 3.35e-01 | 87.8% | 80.0% |
| 3941849 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.60 | 49.0 | 3.38e-01 | 93.9% | 40.0% |
| 4013892 | 148.1.3.212 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13 | 0.59 | 51.0 | 4.06e-01 | 98.0% | 94.0% |
| 3680492 | 4.1.1.298 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26133 | 0.55 | 42.0 | 3.15e-01 | 95.9% | 32.8% |
| 3386364 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 39.0 | 2.49e-01 | 77.6% | 20.0% |
| 3243887 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 44.0 | 3.04e-01 | 100.0% | 43.9% |