←Back to structures

AP014693.1__BAQ02529.2__X__00001

Bact-Vir

AP014693.1__BAQ02529.2__X__00001

Identity

Accession:
AP014693 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Chiangmaivirus› Ralstonia_phage_RSL2

TaxID: 1585840

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-84
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4xw3A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.86 77.0 5.72e-01 100.0% 42.1%
4p9iA00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.79 73.0 5.75e-01 100.0% 65.6%
5ji7A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.78 72.0 5.37e-01 100.0% 44.7%
4qt6A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.73 64.0 5.15e-01 95.2% 52.2%
4cciA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 59.0 4.19e-01 90.5% 66.3%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 56.0 4.74e-01 90.5% 55.1%
3h3lC00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.66 55.0 4.04e-01 91.7% 65.5%
3hbkA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.65 54.0 3.94e-01 90.5% 60.2%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.64 43.0 4.28e-01 70.2% 86.7%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 53.0 4.19e-01 96.4% 48.0%
4pbpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 54.0 4.07e-01 98.8% 53.9%
1d2sA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 50.0 4.02e-01 90.5% 51.2%
2jkbA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 53.0 4.12e-01 98.8% 57.3%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 53.0 4.09e-01 98.8% 56.1%
4dqaA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 3.92e-01 98.8% 45.5%
3pvnA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 3.89e-01 97.6% 50.5%
3pveA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 49.0 3.90e-01 92.9% 55.4%
3u1xA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.58 48.0 3.62e-01 91.7% 63.1%
2mtzA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.58 40.0 3.53e-01 70.2% 91.6%
8adlB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 45.0 3.06e-01 84.5% 96.5%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 3.76e-01 98.8% 52.1%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.57 39.0 3.15e-01 71.4% 65.0%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 43.0 2.95e-01 84.5% 95.5%
2psbA00 3.50.90.10 Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like 0.55 44.0 3.09e-01 88.1% 98.6%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.75e-01 84.5% 88.7%
8a7dC01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.45e-01 97.6% 65.3%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 41.0 2.70e-01 82.1% 92.5%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 39.0 2.70e-01 79.8% 93.7%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.91e-01 88.1% 96.3%
3b8bA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.52 38.0 3.18e-01 78.6% 88.7%
4xvcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 43.0 3.12e-01 100.0% 75.4%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 44.0 3.28e-01 98.8% 47.9%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 4.09e-01 88.1% 96.7%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 35.0 3.52e-01 90.5% 69.8%
6yleA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 38.0 2.54e-01 83.3% 70.7%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4166761 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.85 76.0 5.55e-01 100.0% 39.0%
None — 0.84 74.0 5.62e-01 100.0% 43.2%
3817403 109.46.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) 0.82 73.0 4.60e-01 100.0% 20.8%
3791045 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.80 74.0 6.17e-01 100.0% 71.4%
3799751 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.80 73.0 4.98e-01 100.0% 32.4%
4023396 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.79 73.0 5.12e-01 100.0% 36.7%
3368679 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.78 71.0 5.07e-01 100.0% 38.3%
3496295 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.78 71.0 5.14e-01 100.0% 44.0%
3487147 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.78 71.0 5.07e-01 100.0% 42.1%
3658717 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.77 71.0 5.08e-01 100.0% 43.0%
3598346 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.77 64.0 5.16e-01 90.5% 65.8%
3260311 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.76 64.0 3.86e-01 100.0% 14.1%
3713750 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.74 61.0 4.89e-01 88.1% 63.1%
5032518 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.72 57.0 5.44e-01 84.5% 73.7%
3298595 10.1.1.11 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.67 54.0 4.49e-01 90.5% 74.2%
3995842 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.66 56.0 4.25e-01 92.9% 43.3%
3427602 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.66 51.0 3.47e-01 84.5% 92.1%
3927052 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.65 47.0 4.21e-01 76.2% 54.8%
3701432 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.64 57.0 5.25e-01 100.0% 82.7%
3702424 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.64 56.0 4.89e-01 97.6% 76.0%
2982808 10.1.1.5 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin 0.62 53.0 4.10e-01 96.4% 44.6%
1101 10.1.1.18 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sialidase 0.61 53.0 4.09e-01 98.8% 56.1%
3680747 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 46.0 2.93e-01 82.1% 87.1%
3779878 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.60 52.0 4.21e-01 96.4% 63.7%
5068015 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.60 42.0 4.41e-01 73.8% 84.0%
3510204 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.59 49.0 3.19e-01 92.9% 23.7%
3585077 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.59 49.0 4.41e-01 92.9% 76.7%
1317200 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.57 45.0 3.39e-01 86.9% 40.6%
3765454 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.57 49.0 4.29e-01 97.6% 79.2%
5030605 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.55 49.0 4.15e-01 98.8% 67.9%
3923930 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 44.0 4.03e-01 86.9% 87.3%
3517106 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 40.0 2.83e-01 81.0% 83.4%
3738230 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 38.0 2.49e-01 72.6% 88.8%
3958604 2003.1.2.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.54 31.0 2.44e-01 75.0% 23.6%
3491137 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.51 30.0 3.35e-01 85.7% 78.3%
3999508 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 31.0 3.31e-01 85.7% 71.4%
3994028 5.1.3.205 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_RIC1_2nd 0.50 42.0 2.49e-01 96.4% 53.3%
3371889 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.50 38.0 2.54e-01 84.5% 89.7%