←Back to structures
AP014693.1__BAQ02655.1__X__00132
Bact-VirAP014693.1__BAQ02655.1__X__00132
Identity
- Accession:
- AP014693 ↗
- Kingdom:
- phage
Quality
45.1
mean pLDDT
Taxonomy
TaxID: 1585840
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-86
Domain cluster:
rep: MG018927.1__ATW58050.1__CNR34_00117__00115__D8-83
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.68 | 46.0 | 4.08e-01 | 91.3% | 47.9% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 39.0 | 4.25e-01 | 92.5% | 71.2% |
| 4ioyX02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 46.0 | 4.12e-01 | 100.0% | 53.0% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 40.0 | 3.64e-01 | 90.0% | 45.9% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 40.0 | 4.32e-01 | 96.2% | 79.1% |
| 6cngA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.62 | 56.0 | 4.74e-01 | 100.0% | 88.3% |
| 3pl5A03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.61 | 55.0 | 4.78e-01 | 98.8% | 85.1% |
| 3fdjA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.60 | 54.0 | 4.62e-01 | 100.0% | 88.3% |
| 3jr7A03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.60 | 54.0 | 4.60e-01 | 97.5% | 92.7% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 37.0 | 3.66e-01 | 90.0% | 58.1% |
| 5h80B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.59 | 46.0 | 3.34e-01 | 88.7% | 92.0% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 40.0 | 4.30e-01 | 90.0% | 86.4% |
| 3k5iA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.58 | 42.0 | 3.14e-01 | 76.2% | 47.5% |
| 1rh8A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 42.0 | 3.49e-01 | 77.5% | 72.5% |
| 2dm4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 38.0 | 3.66e-01 | 71.2% | 66.0% |
| 5jr6A02 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.55 | 46.0 | 3.80e-01 | 96.2% | 76.9% |
| 2gdqA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 43.0 | 3.95e-01 | 91.3% | 64.5% |
| 3lh4A00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 37.0 | 3.32e-01 | 70.0% | 98.3% |
| 1wf5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.33e-01 | 71.2% | 75.2% |
| 3jvaA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 45.0 | 4.02e-01 | 91.3% | 66.7% |
| 3ugvA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 49.0 | 4.20e-01 | 100.0% | 97.6% |
| 2f9wA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 48.0 | 4.05e-01 | 97.5% | 60.3% |
| 2h3gX02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 47.0 | 3.78e-01 | 100.0% | 85.5% |
| 2zadA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 43.0 | 3.85e-01 | 91.3% | 65.8% |
| 5e53A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 36.0 | 3.48e-01 | 72.5% | 74.2% |
| 4eo3A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 41.0 | 3.50e-01 | 87.5% | 83.3% |
| 3pp9B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 38.0 | 2.98e-01 | 77.5% | 64.9% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.52 | 42.0 | 3.31e-01 | 87.5% | 45.5% |
| 2ep6A01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 39.0 | 3.47e-01 | 82.5% | 77.9% |
| 2gupA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 44.0 | 4.21e-01 | 97.5% | 100.0% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.51 | 42.0 | 3.49e-01 | 97.5% | 50.3% |
| 2d4gA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.51 | 42.0 | 3.31e-01 | 90.0% | 43.1% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 42.0 | 3.89e-01 | 91.3% | 83.7% |
| 1x5kA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 3.55e-01 | 82.5% | 94.1% |
| 2hqyA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 37.0 | 3.01e-01 | 81.2% | 63.7% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5075465 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.77 | 49.0 | 5.53e-01 | 88.7% | 85.0% |
| 3422528 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.75 | 47.0 | 5.31e-01 | 91.3% | 85.0% |
| 3347210 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.74 | 48.0 | 4.63e-01 | 91.3% | 60.2% |
| 5009633 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 44.0 | 4.28e-01 | 92.5% | 54.4% |
| 3439990 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.70 | 43.0 | 4.18e-01 | 91.3% | 55.6% |
| 3882163 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 38.0 | 2.61e-01 | 81.2% | 17.6% |
| 3563547 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.63 | 45.0 | 3.91e-01 | 98.8% | 48.0% |
| 4945655 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 44.0 | 4.17e-01 | 100.0% | 60.0% |
| 2507396 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.62 | 55.0 | 4.73e-01 | 97.5% | 88.1% |
| 4945379 | 301.13.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain | 0.62 | 54.0 | 4.67e-01 | 96.2% | 88.8% |
| 4355756 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.61 | 41.0 | 3.04e-01 | 88.7% | 24.9% |
| 1937091 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.61 | 54.0 | 4.62e-01 | 97.5% | 88.1% |
| 4961432 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.61 | 47.0 | 4.48e-01 | 91.3% | 70.5% |
| 3320855 | 12.3.1.41 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Raffinose_syn | 0.61 | 42.0 | 3.28e-01 | 72.5% | 68.1% |
| 4945438 | 301.13.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain | 0.61 | 54.0 | 4.60e-01 | 98.8% | 86.9% |
| 3589392 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.60 | 54.0 | 4.63e-01 | 100.0% | 91.5% |
| 1937177 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.60 | 54.0 | 4.60e-01 | 97.5% | 92.7% |
| 3439471 | 12.3.1.41 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Raffinose_syn | 0.60 | 42.0 | 3.25e-01 | 73.8% | 64.9% |
| 4660425 | 101.35.1.5 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 | 0.59 | 38.0 | 3.41e-01 | 87.5% | 45.2% |
| 3588328 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.59 | 51.0 | 4.38e-01 | 97.5% | 90.8% |
| 3213163 | 2484.1.1.162 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box | 0.58 | 53.0 | 4.47e-01 | 100.0% | 87.7% |
| 3174848 | 220.1.1.36 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 | 0.58 | 48.0 | 3.52e-01 | 95.0% | 34.0% |
| 3514476 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.58 | 41.0 | 3.27e-01 | 95.0% | 34.9% |
| 4956002 | 2484.4.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like | 0.57 | 48.0 | 4.41e-01 | 95.0% | 80.9% |
| 3281114 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.55 | 45.0 | 3.78e-01 | 91.3% | 52.9% |
| 3997451 | 206.1.3.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C | 0.55 | 40.0 | 3.23e-01 | 76.2% | 60.0% |
| 3213112 | 11.1.1.862 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_RIMBP2 | 0.54 | 37.0 | 3.38e-01 | 71.2% | 89.1% |
| 3839028 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 37.0 | 4.03e-01 | 72.5% | 98.5% |
| 1679996 | 11.2.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › IcmF_C | 0.53 | 44.0 | 4.05e-01 | 95.0% | 86.4% |
| 5068640 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 40.0 | 3.76e-01 | 83.7% | 91.0% |
| 4963509 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 34.0 | 3.23e-01 | 70.0% | 97.0% |
| 3483331 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 34.0 | 3.56e-01 | 71.2% | 84.0% |
| 10332 | 7520.1.1.1 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA | 0.51 | 42.0 | 3.32e-01 | 91.3% | 45.5% |
D2
high
residues 104-206