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AP014693.1__BAQ02656.1__X__00133

Bact-Vir

AP014693.1__BAQ02656.1__X__00133

Identity

Accession:
AP014693 ↗
Kingdom:
phage

Quality

94.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Chiangmaivirus› Ralstonia_phage_RSL2

TaxID: 1585840

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-95
PDB
Domain cluster: rep: KR093636.1__AKI27534.1__X__00032__D2-70
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF15919.12 best HicB_lk_antitox 101.2 5.90e-29 96.7% 69.1%
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4p78A00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.86 75.0 7.75e-01 93.4% 100.0%
6g1nD01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.81 69.0 7.20e-01 93.4% 100.0%
5yrzA01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.81 73.0 6.97e-01 97.8% 100.0%
3kwrA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.80 69.0 7.25e-01 100.0% 100.0%
1wv8A00 3.30.2390.10 Alpha Beta › 2-Layer Sandwich › TTHA1013/TTHA0281-like › TTHA1013-like 0.74 50.0 5.57e-01 89.0% 88.7%
2dsyD00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.73 57.0 6.00e-01 100.0% 91.4%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 55.0 5.62e-01 97.8% 86.5%
6torA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.64 49.0 3.52e-01 81.3% 39.1%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 34.0 3.73e-01 93.4% 65.8%
3nyiA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.60 48.0 4.22e-01 86.8% 90.5%
1t7lB01 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.60 44.0 2.92e-01 76.9% 36.5%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 32.0 3.62e-01 92.3% 68.6%
2qkbA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 42.0 3.55e-01 75.8% 74.3%
3r9mA00 1.25.40.280 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains 0.57 47.0 3.15e-01 91.2% 94.4%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 32.0 3.92e-01 95.6% 86.4%
1vw4502 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 47.0 4.74e-01 98.9% 88.0%
3weeB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 46.0 4.20e-01 90.1% 75.4%
2awnC02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 32.0 3.42e-01 95.6% 64.1%
3d31A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 27.0 3.61e-01 91.2% 87.0%
2ahoB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 33.0 3.48e-01 92.3% 67.5%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 32.0 3.18e-01 95.6% 54.7%
2qgqA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 30.0 3.53e-01 94.5% 81.7%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 31.0 3.59e-01 93.4% 81.2%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 32.0 3.63e-01 94.5% 83.1%
8dkrB01 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.53 42.0 3.18e-01 96.7% 34.9%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 31.0 3.53e-01 94.5% 84.6%
2opiA00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.51 37.0 2.81e-01 75.8% 46.5%
1wrjA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.50 29.0 3.19e-01 81.3% 71.6%
1u0lA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 29.0 3.36e-01 92.3% 81.2%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2410066 4100.1.1.3 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.94 90.0 9.03e-01 100.0% 98.9%
3964270 4100.1.1.3 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.93 89.0 8.95e-01 98.9% 100.0%
4967355 4100.1.1.3 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.87 60.0 7.01e-01 72.5% 100.0%
5029920 4100.1.1.3 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.85 58.0 6.76e-01 81.3% 98.5%
2538763 4100.1.1.5 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB-like_2 0.84 65.0 7.12e-01 92.3% 97.3%
5002624 4100.1.1.3 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.82 60.0 6.77e-01 79.1% 98.6%
4431929 4100.1.1.4 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › UPF0150 0.82 57.0 6.58e-01 72.5% 100.0%
2330315 4100.1.1.5 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB-like_2 0.81 73.0 6.78e-01 97.8% 93.9%
4969332 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.81 52.0 6.22e-01 89.0% 98.3%
4289599 4100.1.1.5 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB-like_2 0.81 60.0 6.73e-01 89.0% 100.0%
1393619 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.80 69.0 7.25e-01 100.0% 100.0%
1346560 4100.1.1.3 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.79 71.0 7.15e-01 98.9% 98.9%
4497086 4100.1.1.5 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB-like_2 0.77 63.0 6.72e-01 92.3% 98.8%
4948406 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.76 51.0 6.14e-01 84.6% 100.0%
5048184 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.75 59.0 5.93e-01 81.3% 97.8%
7730 4100.1.1.1 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF1902 0.74 50.0 5.57e-01 89.0% 88.7%
7731 4100.1.1.4 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › UPF0150 0.74 57.0 6.11e-01 100.0% 92.5%
4944829 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.71 36.0 4.85e-01 95.6% 100.0%
5075488 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.69 48.0 5.53e-01 80.2% 97.1%
4980248 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.68 40.0 4.81e-01 98.9% 91.4%
3825518 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.68 46.0 5.02e-01 100.0% 85.3%
5003743 2.14.1.6 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › DUF3006 0.67 37.0 4.87e-01 93.4% 100.0%
5062942 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.65 38.0 4.61e-01 97.8% 92.7%
3298796 3131.1.1.1 ↗ a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC 0.65 43.0 3.64e-01 100.0% 42.1%
3782338 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 45.0 4.56e-01 98.9% 71.0%
5018098 2.14.1.6 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › DUF3006 0.65 38.0 4.15e-01 96.7% 70.7%
4951103 2.1.1.366 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3006 0.63 37.0 4.03e-01 96.7% 70.7%
3250994 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 36.0 4.22e-01 93.4% 83.1%
5048262 304.6.1.0 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain 0.61 42.0 3.06e-01 71.4% 46.8%
5035697 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 30.0 3.41e-01 91.2% 61.5%
5037031 331.2.1.1 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.59 42.0 4.07e-01 74.7% 100.0%
3880677 2.1.1.251 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_HELZ2 0.58 33.0 3.48e-01 92.3% 60.0%
3626166 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 32.0 3.38e-01 93.4% 57.6%
4337994 5089.1.1.2 ↗ beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › MACPF 0.58 42.0 2.96e-01 76.9% 67.2%
4678731 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.57 34.0 3.87e-01 94.5% 81.5%
4250239 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.57 34.0 3.93e-01 95.6% 83.1%
5037858 2484.2.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain 0.56 32.0 3.59e-01 82.4% 71.4%
4119533 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.56 32.0 3.86e-01 93.4% 86.7%
3851686 2.1.1.49 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MRP-S35 0.56 31.0 3.20e-01 94.5% 55.6%
1524863 2.4.1.7 ↗ beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK 0.56 33.0 3.41e-01 98.9% 61.6%
3721841 304.129.1.1 ↗ a+b two layers › Alpha-beta plaits › Middle domain in a putative metallopeptidase YP_676511.1 › Middle domain in a putative metallopeptidase YP_676511.1 › DUF1485 0.55 38.0 3.47e-01 73.6% 96.8%
3626865 2.1.1.49 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MRP-S35 0.53 30.0 2.73e-01 94.5% 38.5%
4541291 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.52 44.0 3.33e-01 100.0% 37.8%
3615993 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 30.0 3.03e-01 93.4% 54.7%
3516863 330.1.1.10 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 0.52 45.0 4.50e-01 100.0% 90.5%
4946960 2.1.1.361 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EIF_2_alpha 0.52 32.0 3.41e-01 92.3% 71.2%
4942953 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.51 32.0 3.24e-01 93.4% 61.1%
4994639 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.51 32.0 3.29e-01 93.4% 64.4%
5035454 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 32.0 3.50e-01 93.4% 77.3%
4943372 2.1.1.361 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EIF_2_alpha 0.51 32.0 3.35e-01 92.3% 71.2%