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AP014693.1__BAU71404.1__X__00055
Bact-VirAP014693.1__BAU71404.1__X__00055
Identity
- Accession:
- AP014693 ↗
- Kingdom:
- phage
Quality
80.2
mean pLDDT
Taxonomy
TaxID: 1585840
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-99
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.67 | 51.0 | 4.64e-01 | 85.5% | 85.1% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.66 | 52.0 | 4.68e-01 | 98.4% | 61.1% |
| 6pmiF01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.64 | 45.0 | 4.20e-01 | 75.8% | 62.5% |
| 1d5rA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.62 | 46.0 | 3.36e-01 | 88.7% | 28.7% |
| 1sigA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.62 | 50.0 | 3.28e-01 | 93.5% | 92.8% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.61 | 48.0 | 4.34e-01 | 95.2% | 61.8% |
| 4v19K02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.61 | 49.0 | 4.68e-01 | 91.9% | 92.0% |
| 5y6qB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.59 | 46.0 | 3.97e-01 | 88.7% | 52.8% |
| 2pajA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 46.0 | 3.04e-01 | 93.5% | 46.7% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 43.0 | 3.50e-01 | 88.7% | 90.0% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 39.0 | 3.08e-01 | 82.3% | 85.3% |
| 2qsaA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.53 | 43.0 | 3.75e-01 | 91.9% | 69.3% |
| 4cc9B00 | 1.20.5.4730 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 37.0 | 3.21e-01 | 72.6% | 60.2% |
| 4g3dB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 38.0 | 2.86e-01 | 83.9% | 60.0% |
| 4xr7E01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 44.0 | 2.89e-01 | 98.4% | 60.1% |
| 7qocA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 37.0 | 2.81e-01 | 80.6% | 31.6% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.52 | 35.0 | 3.46e-01 | 71.0% | 100.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.72 | 53.0 | 3.74e-01 | 77.4% | 28.9% |
| 4066835 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.63 | 51.0 | 4.20e-01 | 93.5% | 58.4% |
| 1715101 | 101.1.2.73 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82 | 0.61 | 45.0 | 3.48e-01 | 82.3% | 37.9% |
| 3176372 | 3949.1.1.3 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › SLS1_N | 0.59 | 46.0 | 4.47e-01 | 87.1% | 97.1% |
| 4996260 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.58 | 39.0 | 3.02e-01 | 71.0% | 55.5% |
| 3839206 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.57 | 49.0 | 4.59e-01 | 100.0% | 78.8% |
| 3703539 | 130.1.2.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › ribosome-binding domain of Mdm38 › LETM1_RBD | 0.56 | 46.0 | 3.41e-01 | 100.0% | 55.9% |
| 3936678 | 164.1.1.0 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II | 0.56 | 39.0 | 3.67e-01 | 75.8% | 70.0% |
| 3974457 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.55 | 45.0 | 2.96e-01 | 96.8% | 19.5% |
| 3601447 | 130.1.2.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › ribosome-binding domain of Mdm38 | 0.52 | 44.0 | 3.14e-01 | 96.8% | 76.6% |
| 4943887 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.52 | 45.0 | 2.99e-01 | 100.0% | 88.5% |
| 3264368 | 101.1.2.252 ↗ | alpha arrays › HTH › HTH › winged helix domain › OHA | 0.51 | 42.0 | 3.90e-01 | 100.0% | 77.6% |