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AP014858.1__BAV80808.1__X__00025

Bact-Vir

AP014858.1__BAV80808.1__X__00025

Identity

Accession:
AP014858 ↗
Kingdom:
phage

Quality

57.5 mean pLDDT

Taxonomy

TaxID: 1653734

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 79-156
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 45.0 5.11e-01 71.8% 80.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 46.0 5.18e-01 76.9% 84.5%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 50.0 5.67e-01 84.6% 100.0%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 44.0 5.09e-01 75.6% 85.7%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 45.0 4.82e-01 82.1% 73.1%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 47.0 5.07e-01 80.8% 79.1%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 47.0 4.67e-01 75.6% 65.0%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 45.0 5.00e-01 74.4% 82.0%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 48.0 5.13e-01 87.2% 79.7%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.32e-01 85.9% 81.9%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 4.93e-01 93.6% 67.4%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 46.0 5.07e-01 75.6% 82.8%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 5.09e-01 85.9% 77.3%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 45.0 4.87e-01 74.4% 78.5%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.04e-01 83.3% 41.3%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 5.06e-01 85.9% 79.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 42.0 4.85e-01 75.6% 85.7%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 47.0 5.15e-01 87.2% 85.9%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 49.0 4.88e-01 85.9% 72.5%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 5.23e-01 75.6% 91.8%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.59e-01 85.9% 65.5%
1fc3B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 4.82e-01 83.3% 79.2%
4ch7A01 1.10.10.2890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 52.0 4.58e-01 83.3% 66.4%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 4.92e-01 82.1% 81.4%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 5.07e-01 75.6% 88.9%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 4.91e-01 87.2% 83.3%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 46.0 4.49e-01 88.5% 64.8%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.10e-01 91.0% 47.3%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.74e-01 84.6% 75.6%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 41.0 4.36e-01 87.2% 71.4%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 49.0 4.96e-01 85.9% 81.6%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.66e-01 85.9% 72.4%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.81e-01 88.5% 75.9%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 3.89e-01 89.7% 44.3%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 4.20e-01 93.6% 60.6%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 5.09e-01 89.7% 93.0%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.62 50.0 4.43e-01 85.9% 86.2%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.70e-01 100.0% 80.5%
1etkA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 40.0 4.15e-01 100.0% 70.7%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 3.82e-01 88.5% 48.0%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.61 54.0 3.91e-01 98.7% 75.7%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.61 47.0 3.99e-01 85.9% 49.6%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.60 43.0 3.67e-01 75.6% 52.6%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 44.0 4.02e-01 88.5% 58.7%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 4.67e-01 84.6% 90.3%
3gwzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.73e-01 100.0% 83.1%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 4.45e-01 93.6% 86.1%
1iyrA00 1.10.1490.10 Mainly Alpha › Orthogonal Bundle › Dna Fragmentation Factor Alpha Subunit; Chain: A; › C-terminal domain of DFF45/ICAD (DFF-C domain) 0.58 40.0 3.98e-01 84.6% 67.5%
4kibA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 4.05e-01 89.7% 74.7%
5fglA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 39.0 2.92e-01 75.6% 59.0%
3iwfB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.92e-01 85.9% 89.9%
4p3fA00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.50 39.0 3.04e-01 88.5% 93.8%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4486973 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 46.0 4.54e-01 73.1% 58.8%
4947436 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 48.0 5.59e-01 80.8% 96.4%
4165188 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 46.0 4.48e-01 71.8% 58.8%
3974184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 48.0 5.59e-01 82.1% 98.2%
4997411 101.1.3.33 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.72 49.0 4.92e-01 82.1% 68.8%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.72 49.0 4.78e-01 91.0% 64.7%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.72 41.0 4.89e-01 70.5% 88.0%
4944862 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 48.0 4.82e-01 80.8% 68.8%
4934485 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.70 48.0 4.97e-01 82.1% 74.3%
4008147 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.70 49.0 5.34e-01 88.5% 89.2%
None 0.70 49.0 4.69e-01 84.6% 63.3%
5064701 101.1.2.879 alpha arrays › HTH › HTH › winged helix domain › DUF134 0.69 49.0 4.87e-01 84.6% 71.2%
149489 101.1.1.95 alpha arrays › HTH › HTH › Three-helical HTH › PhyR_sigma-like 0.69 46.0 4.58e-01 73.1% 66.3%
3668669 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.69 46.0 4.55e-01 73.1% 63.5%
4534822 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.69 49.0 5.00e-01 84.6% 76.0%
4321867 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.69 47.0 4.92e-01 83.3% 78.6%
4084282 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.68 46.0 4.49e-01 73.1% 63.5%
3284469 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.68 45.0 4.67e-01 74.4% 72.0%
4965159 101.1.1.540 alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.68 49.0 5.17e-01 76.9% 85.7%
3288236 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.68 48.0 4.65e-01 83.3% 65.6%
4142399 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.67 49.0 4.70e-01 85.9% 66.7%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.67 40.0 4.48e-01 75.6% 78.3%
3944142 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 45.0 5.09e-01 82.1% 98.2%
4583215 101.1.3.3 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Spo0A_C 0.66 53.0 4.40e-01 85.9% 67.4%
4962234 101.1.1.540 alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.66 48.0 4.93e-01 76.9% 82.7%
3945103 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 45.0 5.19e-01 80.8% 100.0%
3284075 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.66 44.0 5.01e-01 80.8% 98.2%
4588620 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.65 48.0 4.63e-01 85.9% 67.8%
3955106 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.65 50.0 4.77e-01 83.3% 70.0%
3283527 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 47.0 4.69e-01 85.9% 75.0%
3586944 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.64 47.0 4.55e-01 85.9% 67.8%
4178355 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.64 48.0 4.41e-01 83.3% 62.0%
4131842 101.1.3.25 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r3 0.64 47.0 4.78e-01 79.5% 81.3%
3971324 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.63 45.0 5.04e-01 79.5% 98.3%
3971933 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 43.0 4.67e-01 71.8% 87.7%
3969568 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 42.0 4.69e-01 80.8% 96.4%
4980214 4156.1.1.0 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.62 52.0 4.43e-01 93.6% 100.0%
3272598 4156.1.1.5 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › POLQ_helical 0.62 53.0 4.17e-01 94.9% 98.8%
4996547 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 4.28e-01 96.2% 90.3%
4175748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.62 47.0 4.74e-01 82.1% 78.8%
4060124 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.62 42.0 3.43e-01 73.1% 36.1%
5013051 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 48.0 4.04e-01 83.3% 88.5%
3968724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.61 42.0 4.26e-01 83.3% 73.3%
3989015 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 4.52e-01 89.7% 67.6%
4968088 4156.1.1.0 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.60 52.0 4.17e-01 97.4% 97.4%
3977556 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 39.0 4.35e-01 80.8% 94.5%
5005281 4156.1.1.6 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.60 50.0 4.12e-01 94.9% 99.3%
3976347 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 39.0 4.39e-01 78.2% 98.2%
3788791 101.1.2.97 alpha arrays › HTH › HTH › winged helix domain › RPA_C 0.58 50.0 4.97e-01 97.4% 98.8%
4979217 4156.1.1.0 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.58 50.0 4.54e-01 100.0% 97.3%
5005224 101.1.6.39 alpha arrays › HTH › HTH › TrpR › Terminase_5 0.56 44.0 4.25e-01 85.9% 77.8%
4017554 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.54 48.0 4.01e-01 98.7% 76.3%
4941562 101.1.1.19 alpha arrays › HTH › HTH › Three-helical HTH › SRP_SPB 0.53 39.0 3.39e-01 80.8% 83.1%
3264401 6132.1.1.0 alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain 0.51 42.0 4.29e-01 100.0% 97.3%
3173846 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 39.0 3.02e-01 84.6% 36.8%