←Back to structures
AP014858.1__BAV80886.1__X__00103
Bact-VirAP014858.1__BAV80886.1__X__00103
Identity
- Accession:
- AP014858 ↗
- Kingdom:
- phage
Quality
68.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-62
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.67 | 49.0 | 3.24e-01 | 75.8% | 43.9% |
| 7watB02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.64 | 51.0 | 3.24e-01 | 87.1% | 17.9% |
| 1d8cA03 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.56 | 39.0 | 3.06e-01 | 74.2% | 83.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4537420 | 2004.1.1.68 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IstB_IS21 | 0.75 | 64.0 | 4.24e-01 | 93.5% | 51.4% |
| None | — | 0.69 | 59.0 | 3.94e-01 | 95.2% | 52.7% | |
| 4203116 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.68 | 48.0 | 4.73e-01 | 74.2% | 72.3% |
| 3029394 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.67 | 48.0 | 5.08e-01 | 75.8% | 87.0% |
| 4003592 | 3944.1.1.1 ↗ | alpha duplicates or obligate multimers › DNTTIP1 dimerisation domain › DNTTIP1 dimerisation domain › DNTTIP1 dimerisation domain › DNTTIP1_dimer | 0.66 | 53.0 | 4.99e-01 | 87.1% | 72.0% |
| 3850399 | 3788.1.1.13 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › DMAP_binding | 0.65 | 52.0 | 4.65e-01 | 88.7% | 83.3% |
| 3713301 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.65 | 48.0 | 4.23e-01 | 80.6% | 58.9% |
| 3223496 | 568.1.1.7 ↗ | few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related › Cmc1 | 0.59 | 44.0 | 4.06e-01 | 79.0% | 71.2% |
| 3594334 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 45.0 | 2.96e-01 | 82.3% | 66.4% |