AP014858.1BAV80956.1X__00173

Bact-Vir

AP014858.1__BAV80956.1__X__00173

Identity

77.4 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_RYC

TaxID: 1653734

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 18-96

PDB

Domain cluster: rep: MG592459.1__AUR86380.1__NVP1084O_173__00173__D69-126

D2 medium residues 104-146_164-187_282-302

PDB

Domain cluster: rep: MN098326.1__QFG06698.1__CPT_Myduc_076__00075__D272-326_427-435

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF21939.2 best	Gp10_C	31.1	5.70e-07	92.0%	27.5%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1el6A02	2.20.20.20	Mainly Beta › Single Sheet › Anthopleurin-A › Baseplate structural protein gp11, C-terminal domain	0.73	39.0	5.36e-01	93.2%	100.0%
3mb5A02	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.57	45.0	3.52e-01	96.6%	39.4%
2cpiA01	3.30.70.330	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain	0.51	31.0	3.26e-01	85.2%	66.7%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3495629	325.1.8.0 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein	0.60	36.0	3.82e-01	94.3%	66.3%
4928763	2003.1.5.69 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14	0.58	45.0	3.46e-01	96.6%	36.1%
3614659	2003.1.5.69 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14	0.56	49.0	3.49e-01	97.7%	35.6%