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AP014858.1__BAV80990.1__X__00207
Bact-VirAP014858.1__BAV80990.1__X__00207
Identity
- Accession:
- AP014858 ↗
- Kingdom:
- phage
Quality
82.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-52
Domain cluster:
representative
CATH (85)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.75 | 60.0 | 5.20e-01 | 89.4% | 60.0% |
| 3h0dA01 | 3.30.56.130 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain | 0.74 | 56.0 | 4.92e-01 | 83.0% | 71.8% |
| 2hnkA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 59.0 | 3.79e-01 | 89.4% | 25.8% |
| 6baoA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.74 | 59.0 | 4.19e-01 | 89.4% | 68.5% |
| 3c3pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 55.0 | 3.63e-01 | 87.2% | 22.7% |
| 3mczA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 55.0 | 3.52e-01 | 89.4% | 28.9% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.70 | 58.0 | 5.12e-01 | 93.6% | 64.3% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.70 | 54.0 | 4.36e-01 | 87.2% | 53.7% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.70 | 54.0 | 4.47e-01 | 85.1% | 57.6% |
| 2oolA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.70 | 58.0 | 4.48e-01 | 93.6% | 85.0% |
| 2gjhA00 | 3.30.1070.20 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › | 0.70 | 54.0 | 5.14e-01 | 87.2% | 89.5% |
| 8k1fC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 51.0 | 3.43e-01 | 83.0% | 28.6% |
| 2g1pB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 49.0 | 3.51e-01 | 87.2% | 24.7% |
| 2h00B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 53.0 | 3.50e-01 | 89.4% | 21.9% |
| 3douA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 53.0 | 3.60e-01 | 87.2% | 25.1% |
| 7kjhC01 | 2.60.40.2860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 52.0 | 3.87e-01 | 87.2% | 50.8% |
| 1zysA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 51.0 | 4.14e-01 | 87.2% | 53.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.66 | 52.0 | 3.59e-01 | 87.2% | 29.9% |
| 1l1lA03 | 3.90.1390.10 | Alpha Beta › Alpha-Beta Complex › b-12 dependent (class ii) ribonucleotide reductase, chain A, domain 3 › b-12 dependent (class ii) ribonucleotide reductase, chain A, domain 3 | 0.66 | 53.0 | 4.27e-01 | 91.5% | 69.1% |
| 3ntvA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 50.0 | 3.31e-01 | 87.2% | 29.0% |
| 3kd4A01 | 2.60.40.3140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 52.0 | 3.38e-01 | 89.4% | 20.2% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.65 | 51.0 | 3.95e-01 | 91.5% | 39.5% |
| 3gtyX02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.65 | 53.0 | 4.34e-01 | 89.4% | 73.8% |
| 4ymhD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 51.0 | 3.35e-01 | 93.6% | 29.5% |
| 1x60A01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.65 | 52.0 | 4.60e-01 | 91.5% | 72.2% |
| 1r1uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 4.01e-01 | 85.1% | 59.1% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 48.0 | 4.09e-01 | 85.1% | 65.5% |
| 3dmgA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 49.0 | 3.31e-01 | 87.2% | 20.6% |
| 7sebA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 41.0 | 4.25e-01 | 80.9% | 70.5% |
| 6u6pA01 | 3.30.1070.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › Cell division topological specificity factor MinE | 0.64 | 49.0 | 4.20e-01 | 85.1% | 75.6% |
| 1hqiA00 | 3.90.56.10 | Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM | 0.64 | 48.0 | 3.99e-01 | 87.2% | 44.4% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.64 | 52.0 | 4.14e-01 | 100.0% | 43.2% |
| 2cxiA03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.64 | 48.0 | 4.37e-01 | 87.2% | 67.1% |
| 4fpvB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.64 | 53.0 | 3.41e-01 | 100.0% | 26.5% |
| 3v8hC00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.64 | 48.0 | 3.04e-01 | 89.4% | 14.6% |
| 3fezA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 54.0 | 3.73e-01 | 100.0% | 59.2% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.63 | 51.0 | 4.37e-01 | 89.4% | 57.3% |
| 4dcmA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 49.0 | 3.32e-01 | 91.5% | 22.2% |
| 2pmbA01 | 3.30.1850.10 | Alpha Beta › 2-Layer Sandwich › MCP/YpsA-like › MoCo carrier protein-like | 0.62 | 48.0 | 3.70e-01 | 85.1% | 69.2% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 49.0 | 4.08e-01 | 87.2% | 58.3% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 47.0 | 4.02e-01 | 87.2% | 56.5% |
| 2ivfC00 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 49.0 | 3.22e-01 | 89.4% | 47.2% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.62 | 49.0 | 3.75e-01 | 87.2% | 51.9% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 47.0 | 3.71e-01 | 89.4% | 46.4% |
| 2dgrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.62 | 47.0 | 4.24e-01 | 85.1% | 74.6% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 3.78e-01 | 89.4% | 58.0% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 54.0 | 3.75e-01 | 100.0% | 60.5% |
| 2pcrA02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.61 | 51.0 | 3.95e-01 | 100.0% | 42.6% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 44.0 | 3.65e-01 | 87.2% | 55.2% |
| 4ae5C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 51.0 | 3.63e-01 | 100.0% | 63.3% |
| 1wh0A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 46.0 | 3.60e-01 | 87.2% | 73.9% |
| 4nx9A02 | 2.60.40.4390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 45.0 | 3.44e-01 | 85.1% | 66.9% |
| 4iw7A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 48.0 | 3.64e-01 | 89.4% | 39.1% |
| 3pqkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 47.0 | 3.84e-01 | 91.5% | 60.6% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 3.63e-01 | 89.4% | 54.8% |
| 1lfpA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.59 | 50.0 | 4.45e-01 | 100.0% | 93.2% |
| 3r4cA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.59 | 42.0 | 3.43e-01 | 91.5% | 36.6% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 44.0 | 4.08e-01 | 87.2% | 65.2% |
| 4fppA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.59 | 44.0 | 3.33e-01 | 87.2% | 50.4% |
| 3l09A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 3.95e-01 | 91.5% | 76.2% |
| 2pjdA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 43.0 | 3.17e-01 | 87.2% | 44.9% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 3.57e-01 | 87.2% | 55.4% |
| 1lfwA03 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 3.71e-01 | 87.2% | 53.4% |
| 2xdhA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 43.0 | 3.22e-01 | 87.2% | 33.3% |
| 6wqbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 41.0 | 3.08e-01 | 91.5% | 27.0% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 43.0 | 3.83e-01 | 87.2% | 65.8% |
| 2w5yA01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.57 | 46.0 | 3.36e-01 | 100.0% | 45.2% |
| 2nykA02 | 2.60.40.2530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 44.0 | 3.65e-01 | 89.4% | 47.1% |
| 4harA00 | 3.10.50.50 | Alpha Beta › Roll › Chitinase A; domain 3 › Rubella virus capsid protein | 0.56 | 48.0 | 3.78e-01 | 95.7% | 93.9% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 46.0 | 3.72e-01 | 100.0% | 85.4% |
| 2cg9X01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 44.0 | 3.44e-01 | 87.2% | 63.0% |
| 5gt8D02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.55 | 43.0 | 3.43e-01 | 100.0% | 84.4% |
| 4efjA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.55 | 40.0 | 3.09e-01 | 89.4% | 50.0% |
| 2re1A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 41.0 | 3.67e-01 | 87.2% | 62.2% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 48.0 | 3.70e-01 | 100.0% | 83.3% |
| 1yqhA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 44.0 | 3.61e-01 | 100.0% | 82.7% |
| 4qpkB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 38.0 | 2.91e-01 | 80.9% | 49.3% |
| 7alkA01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 38.0 | 2.67e-01 | 76.6% | 66.9% |
| 1qr0A01 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.53 | 44.0 | 3.32e-01 | 95.7% | 55.2% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.53 | 42.0 | 3.47e-01 | 91.5% | 55.2% |
| 1ucrB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.87e-01 | 100.0% | 72.0% |
| 2r4fA03 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.53 | 44.0 | 3.40e-01 | 100.0% | 96.6% |
| 1usmA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.52 | 41.0 | 3.62e-01 | 91.5% | 68.8% |
| 1x9zA02 | 3.30.1370.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain | 0.51 | 38.0 | 3.31e-01 | 91.5% | 53.9% |
| 1dcoA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.51 | 37.0 | 3.18e-01 | 91.5% | 65.7% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3516321 | 4012.4.1.1 ↗ | a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins | 0.80 | 62.0 | 6.39e-01 | 85.1% | 100.0% |
| 4806761 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.80 | 60.0 | 4.56e-01 | 80.9% | 44.8% |
| 3603717 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.75 | 59.0 | 4.99e-01 | 87.2% | 57.5% |
| 4985426 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.73 | 55.0 | 4.45e-01 | 91.5% | 42.1% |
| 5008116 | 304.24.1.39 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 | 0.73 | 57.0 | 4.66e-01 | 91.5% | 47.4% |
| 4938255 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.71 | 55.0 | 4.72e-01 | 87.2% | 55.0% |
| 4985063 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.71 | 55.0 | 5.14e-01 | 87.2% | 69.5% |
| 3603739 | 101.1.1.498 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › LAGLIDADG_3 | 0.70 | 57.0 | 3.44e-01 | 91.5% | 17.2% |
| 4519248 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.70 | 55.0 | 5.42e-01 | 85.1% | 100.0% |
| 3517969 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.70 | 57.0 | 4.50e-01 | 89.4% | 47.4% |
| 3587799 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.69 | 56.0 | 3.85e-01 | 89.4% | 31.6% |
| 3838183 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.69 | 54.0 | 5.16e-01 | 87.2% | 80.0% |
| 4311488 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.69 | 54.0 | 4.55e-01 | 87.2% | 62.5% |
| 4608678 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.67 | 55.0 | 4.63e-01 | 91.5% | 57.5% |
| 3452826 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 53.0 | 3.89e-01 | 89.4% | 36.3% |
| 4946463 | 5103.1.1.0 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 | 0.67 | 57.0 | 4.24e-01 | 100.0% | 50.8% |
| 4580006 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.67 | 52.0 | 4.39e-01 | 89.4% | 57.6% |
| 5057619 | 2004.1.2.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain | 0.67 | 50.0 | 3.24e-01 | 87.2% | 16.8% |
| 4431836 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.67 | 49.0 | 3.29e-01 | 80.9% | 20.0% |
| 3936485 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.67 | 54.0 | 4.24e-01 | 89.4% | 53.0% |
| 1211839 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.67 | 50.0 | 4.12e-01 | 87.2% | 53.1% |
| 4928540 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.66 | 51.0 | 4.94e-01 | 87.2% | 77.8% |
| 3838053 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.66 | 49.0 | 4.56e-01 | 85.1% | 75.4% |
| 5021478 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.66 | 51.0 | 4.88e-01 | 85.1% | 76.4% |
| 3477734 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.66 | 51.0 | 3.60e-01 | 87.2% | 28.4% |
| 5027907 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.66 | 50.0 | 3.82e-01 | 85.1% | 35.7% |
| 5015450 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.66 | 50.0 | 4.31e-01 | 87.2% | 52.5% |
| 5051775 | 2500.1.1.9 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › RNR-II_ins_dom | 0.65 | 54.0 | 3.09e-01 | 93.6% | 25.5% |
| 5008370 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.65 | 50.0 | 4.38e-01 | 87.2% | 57.3% |
| 4976695 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.65 | 52.0 | 4.37e-01 | 95.7% | 84.4% |
| 3604362 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.65 | 49.0 | 4.30e-01 | 85.1% | 58.7% |
| 4668421 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.65 | 53.0 | 4.45e-01 | 91.5% | 68.8% |
| 4612385 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.65 | 51.0 | 4.27e-01 | 89.4% | 57.6% |
| 5023543 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.64 | 51.0 | 4.12e-01 | 91.5% | 46.0% |
| 4988179 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.64 | 49.0 | 4.55e-01 | 87.2% | 64.1% |
| 3955512 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.64 | 51.0 | 3.84e-01 | 89.4% | 44.2% |
| 4955445 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.64 | 50.0 | 4.41e-01 | 89.4% | 58.6% |
| 5043746 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.64 | 55.0 | 4.78e-01 | 100.0% | 100.0% |
| 4934658 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.64 | 48.0 | 4.36e-01 | 87.2% | 60.0% |
| 3308403 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.64 | 51.0 | 3.09e-01 | 89.4% | 13.5% |
| 3838420 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.64 | 55.0 | 4.49e-01 | 100.0% | 95.6% |
| 1481304 | 304.5.1.4 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CdAMP_rec | 0.63 | 47.0 | 4.54e-01 | 87.2% | 74.1% |
| 4445114 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.63 | 49.0 | 3.34e-01 | 91.5% | 22.8% |
| 4950693 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.63 | 50.0 | 4.30e-01 | 95.7% | 90.6% |
| 4932335 | 101.1.9.20 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 | 0.63 | 47.0 | 4.28e-01 | 87.2% | 68.6% |
| 3317118 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.63 | 50.0 | 3.04e-01 | 89.4% | 13.5% |
| 4858172 | 3517.1.1.2 ↗ | a+b complex topology › Polymerase acidic protein › Polymerase acidic protein › Polymerase acidic protein › Bunya_RdRp | 0.62 | 44.0 | 2.89e-01 | 89.4% | 15.4% |
| 3387879 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.61 | 45.0 | 4.23e-01 | 87.2% | 66.2% |
| 3758608 | 320.4.1.7 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › PF26117 | 0.61 | 46.0 | 3.60e-01 | 91.5% | 35.0% |
| 4864419 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.61 | 45.0 | 2.67e-01 | 85.1% | 9.7% |
| 3409077 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.61 | 45.0 | 4.14e-01 | 87.2% | 74.3% |
| 3666051 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 47.0 | 4.01e-01 | 85.1% | 62.5% |
| 3737984 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.61 | 46.0 | 3.68e-01 | 85.1% | 52.0% |
| 4946346 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.61 | 47.0 | 3.65e-01 | 91.5% | 37.3% |
| 3633705 | 109.4.1.2507 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, TPR_IMB1 | 0.61 | 51.0 | 2.80e-01 | 100.0% | 10.1% |
| 4948712 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.60 | 44.0 | 2.58e-01 | 85.1% | 7.7% |
| 3921187 | 320.4.1.7 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › PF26117 | 0.60 | 45.0 | 3.05e-01 | 91.5% | 19.1% |
| 3976762 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.60 | 53.0 | 4.57e-01 | 100.0% | 94.7% |
| 5078925 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 46.0 | 4.07e-01 | 87.2% | 60.0% |
| 4970273 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.60 | 45.0 | 3.78e-01 | 87.2% | 45.6% |
| 4040528 | 304.24.1.16 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › PrmA | 0.59 | 50.0 | 4.19e-01 | 100.0% | 92.2% |
| 5028016 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.59 | 44.0 | 4.04e-01 | 87.2% | 61.4% |
| 4622891 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.59 | 51.0 | 4.42e-01 | 100.0% | 89.3% |
| 4461165 | 101.1.2.773 ↗ | alpha arrays › HTH › HTH › winged helix domain › YaaC | 0.59 | 44.0 | 3.82e-01 | 87.2% | 54.1% |
| 5016913 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.59 | 44.0 | 2.51e-01 | 85.1% | 47.1% |
| 5019512 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.58 | 43.0 | 2.49e-01 | 85.1% | 44.9% |
| 4981509 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.58 | 44.0 | 4.04e-01 | 89.4% | 77.1% |
| 4028000 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 46.0 | 3.91e-01 | 89.4% | 53.8% |
| 4999682 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.58 | 48.0 | 4.24e-01 | 100.0% | 98.7% |
| 4949170 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.58 | 43.0 | 2.55e-01 | 85.1% | 41.1% |
| 4990535 | 305.2.1.2 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › DUF2067 | 0.57 | 44.0 | 4.08e-01 | 89.4% | 67.7% |
| 5078855 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.56 | 46.0 | 4.09e-01 | 100.0% | 98.7% |
| 4093818 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.56 | 45.0 | 4.05e-01 | 100.0% | 89.3% |
| 4490111 | 2003.1.5.68 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS_N | 0.56 | 41.0 | 3.10e-01 | 87.2% | 30.0% |
| 3223768 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.55 | 40.0 | 3.80e-01 | 89.4% | 63.1% |
| 5024525 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 40.0 | 3.95e-01 | 87.2% | 74.5% |
| 3387138 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.55 | 47.0 | 4.12e-01 | 100.0% | 97.3% |
| 4059719 | 304.9.1.61 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Thc1_RRM | 0.55 | 48.0 | 4.13e-01 | 100.0% | 93.3% |
| 5022354 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 40.0 | 3.70e-01 | 91.5% | 57.3% |
| 4653000 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.55 | 44.0 | 4.01e-01 | 100.0% | 95.7% |
| 4391867 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.54 | 40.0 | 2.36e-01 | 85.1% | 34.8% |
| 4942790 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.54 | 39.0 | 3.52e-01 | 87.2% | 51.2% |
| 5077051 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.54 | 42.0 | 3.59e-01 | 100.0% | 73.7% |
| 3517748 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.54 | 41.0 | 3.18e-01 | 91.5% | 33.1% |
| 4120009 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.54 | 42.0 | 3.25e-01 | 85.1% | 57.1% |
| 5075870 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.53 | 38.0 | 2.32e-01 | 85.1% | 63.5% |
| 3582652 | 4970.1.1.3 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_B_2 | 0.53 | 39.0 | 3.33e-01 | 83.0% | 47.1% |
| 3512685 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.52 | 43.0 | 3.19e-01 | 100.0% | 55.4% |
| 3303034 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.51 | 37.0 | 3.35e-01 | 85.1% | 65.3% |