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AP014889.1__BAV81221.1__X__00070

Bact-Vir

AP014889.1__BAV81221.1__X__00070

Identity

Accession:
AP014889 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Demerecviridae› Vibrio_phage_VCPH

TaxID: 1674945

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-57
PDB
Domain cluster: rep: OQ995431.1__WMI33766.1__SEA_PATELGO_154__00130__D7-55
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h7jA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 52.0 4.08e-01 84.6% 84.5%
4wsiA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 53.0 4.95e-01 90.4% 95.5%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.64 50.0 4.46e-01 100.0% 59.7%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 56.0 5.32e-01 100.0% 91.8%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 53.0 5.27e-01 100.0% 92.5%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.76e-01 100.0% 78.3%
3e19B01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 54.0 5.11e-01 100.0% 93.8%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.45e-01 100.0% 67.1%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.60 51.0 4.02e-01 100.0% 91.5%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 53.0 5.08e-01 100.0% 93.2%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 50.0 4.68e-01 100.0% 77.3%
1db3A02 3.90.25.10 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 0.53 44.0 3.49e-01 98.1% 56.9%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3257276 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 4.65e-01 100.0% 46.4%
515 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 57.0 4.71e-01 100.0% 95.7%
3970000 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.54e-01 100.0% 63.0%
3624338 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.34e-01 98.1% 98.2%
3498585 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 55.0 4.23e-01 100.0% 89.2%
3482860 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 55.0 4.64e-01 100.0% 92.2%
4594253 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 52.0 4.79e-01 96.2% 97.1%
4928052 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.58 51.0 3.10e-01 100.0% 66.3%
3695948 5.1.4.56 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 0.56 46.0 2.74e-01 100.0% 26.9%
4507204 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.53 38.0 2.83e-01 80.8% 29.0%
3678022 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.52 43.0 3.00e-01 98.1% 44.7%
4017305 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 44.0 2.78e-01 100.0% 19.0%