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AP014927.1__BAS05020.2__X__00235
Bact-VirAP014927.1__BAS05020.2__X__00235
Identity
- Accession:
- AP014927 ↗
- Kingdom:
- phage
Quality
88.3
mean pLDDT
Taxonomy
TaxID: 1689679
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-83
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.78 | 58.0 | 4.52e-01 | 96.3% | 38.7% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.74 | 51.0 | 4.24e-01 | 81.5% | 42.9% |
| 2ouwB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.74 | 53.0 | 4.40e-01 | 79.0% | 44.1% |
| 1vh6A01 | 6.10.140.1940 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 42.0 | 3.99e-01 | 81.5% | 48.5% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.72 | 50.0 | 4.20e-01 | 72.8% | 44.2% |
| 2yxlA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.71 | 50.0 | 4.05e-01 | 74.1% | 43.4% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.71 | 50.0 | 4.60e-01 | 72.8% | 59.4% |
| 2mabA00 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.69 | 49.0 | 4.51e-01 | 75.3% | 69.7% |
| 2v0oB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.68 | 60.0 | 4.14e-01 | 96.3% | 56.8% |
| 5mlc900 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.67 | 54.0 | 4.93e-01 | 86.4% | 100.0% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.66 | 47.0 | 3.93e-01 | 74.1% | 44.0% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.65 | 43.0 | 4.62e-01 | 72.8% | 79.7% |
| 3vokA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 52.0 | 4.14e-01 | 91.4% | 42.0% |
| 5zr4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 3.81e-01 | 71.6% | 55.9% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 42.0 | 3.77e-01 | 77.8% | 58.6% |
| 1u3dA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 39.0 | 3.36e-01 | 76.5% | 57.5% |
| 1v64A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.54 | 41.0 | 3.71e-01 | 80.2% | 61.1% |
| 3ibyD02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 42.0 | 4.16e-01 | 84.0% | 90.5% |
| 2rkkA01 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.53 | 38.0 | 3.07e-01 | 74.1% | 46.8% |
| 3triA02 | 1.10.3730.10 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like | 0.51 | 42.0 | 3.91e-01 | 90.1% | 80.6% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3189791 | 601.19.1.18 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Mmc1_C | 0.78 | 62.0 | 4.39e-01 | 85.2% | 30.4% |
| 5042310 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.77 | 52.0 | 4.38e-01 | 72.8% | 42.2% |
| 3348367 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.73 | 55.0 | 3.45e-01 | 81.5% | 15.6% |
| 4020519 | 633.15.1.0 ↗ | alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N | 0.72 | 57.0 | 4.50e-01 | 84.0% | 68.1% |
| 4048127 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 54.0 | 5.36e-01 | 82.7% | 76.5% |
| 3965372 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.70 | 51.0 | 4.47e-01 | 76.5% | 92.5% |
| 5034762 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.69 | 52.0 | 4.38e-01 | 80.2% | 91.1% |
| 4390743 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.68 | 61.0 | 4.84e-01 | 100.0% | 63.0% |
| 3705139 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.62 | 53.0 | 4.34e-01 | 97.5% | 51.7% |
| 4028949 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.61 | 45.0 | 3.46e-01 | 79.0% | 95.1% |
| 4931685 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.61 | 49.0 | 4.04e-01 | 86.4% | 99.3% |
| 3597181 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.60 | 47.0 | 4.94e-01 | 91.4% | 90.7% |
| 4976557 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.59 | 42.0 | 3.22e-01 | 74.1% | 53.6% |
| 5034431 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.58 | 46.0 | 3.84e-01 | 85.2% | 97.9% |
| 4091013 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.57 | 42.0 | 3.36e-01 | 80.2% | 76.1% |
| 4060755 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 47.0 | 3.96e-01 | 91.4% | 100.0% |
| 3720888 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.57 | 41.0 | 4.28e-01 | 75.3% | 86.7% |
| 3471666 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.55 | 38.0 | 4.00e-01 | 71.6% | 81.3% |
| 4952111 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.54 | 45.0 | 3.70e-01 | 90.1% | 91.7% |
| 5053927 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.54 | 46.0 | 3.83e-01 | 93.8% | 97.9% |
| 4952257 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.53 | 42.0 | 3.85e-01 | 84.0% | 99.0% |
| 3921644 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 37.0 | 3.22e-01 | 75.3% | 63.0% |
| 3994015 | 604.32.1.0 ↗ | alpha bundles › Spectrin repeat-like › Recombination protein uvsY › Recombination protein uvsY | 0.52 | 42.0 | 3.80e-01 | 92.6% | 62.5% |
| 3854605 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.52 | 42.0 | 3.79e-01 | 87.7% | 94.5% |
| 3633769 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.51 | 46.0 | 3.94e-01 | 97.5% | 87.2% |
| 1206851 | 183.1.1.1 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C | 0.51 | 37.0 | 3.73e-01 | 75.3% | 96.3% |
| 3693124 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.50 | 37.0 | 3.65e-01 | 81.5% | 71.1% |