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AP017903.1__BAX03428.1__X__00023
Bact-VirAP017903.1__BAX03428.1__X__00023
Identity
- Accession:
- AP017903 ↗
- Kingdom:
- phage
Quality
54.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Crassvirales›
Suoliviridae›
Dechshavirus›
Azobacteroides_phage_ProJPt-Bp1
TaxID: 1920526
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-79_302-339
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jndA01 | 1.10.1740.220 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.62 | 48.0 | 4.47e-01 | 89.5% | 66.9% |
| 2debA03 | 3.30.559.70 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Choline/Carnitine o-acyltransferase, domain 2 | 0.59 | 49.0 | 3.56e-01 | 89.5% | 81.9% |
| 3veaA01 | 1.20.1270.380 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › MatP, N-terminal domain | 0.55 | 39.0 | 4.19e-01 | 73.3% | 95.5% |
| 3bz6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 35.0 | 3.78e-01 | 82.9% | 75.6% |
| 1bvp103 | 1.10.170.10 | Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 3 › Bluetongue Virus 10, subunit 1, domain 3 | 0.53 | 35.0 | 3.69e-01 | 87.6% | 75.0% |
| 3rv0C02 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.52 | 36.0 | 3.25e-01 | 70.5% | 77.1% |
| 3bc8A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 43.0 | 3.93e-01 | 90.5% | 92.0% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.52 | 36.0 | 3.99e-01 | 94.3% | 96.2% |
| 1wolA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.51 | 42.0 | 4.09e-01 | 91.4% | 98.4% |
| 3d19B00 | 1.20.1260.120 | Mainly Alpha › Up-down Bundle › Ferritin › Protein of unknown function DUF2935 | 0.51 | 41.0 | 3.05e-01 | 85.7% | 95.0% |
| 5lx8A00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 38.0 | 2.47e-01 | 81.0% | 59.2% |
| 1aoaA01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.50 | 39.0 | 3.75e-01 | 82.9% | 79.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3496761 | 2003.1.9.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins | 0.65 | 48.0 | 3.16e-01 | 78.1% | 36.1% |
| 3479583 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.64 | 47.0 | 2.98e-01 | 78.1% | 28.3% |
| 4989791 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.56 | 41.0 | 2.97e-01 | 89.5% | 25.9% |
| 3492262 | 327.19.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › Mlh1_C | 0.56 | 43.0 | 4.46e-01 | 84.8% | 94.0% |
| 3267986 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.54 | 42.0 | 3.31e-01 | 81.9% | 89.1% |
| 5066757 | 304.128.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB › FtsX | 0.53 | 38.0 | 3.01e-01 | 75.2% | 49.3% |
| 4969330 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.52 | 43.0 | 4.07e-01 | 91.4% | 93.8% |
| 3293941 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.52 | 38.0 | 3.06e-01 | 76.2% | 81.4% |
| 3889018 | 632.1.1.11 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › HYOU1_C | 0.51 | 34.0 | 3.87e-01 | 79.0% | 88.7% |
| 3482980 | 4957.2.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases | 0.51 | 37.0 | 3.41e-01 | 75.2% | 74.8% |
| 3523496 | 632.7.1.25 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › PF27508 | 0.51 | 34.0 | 3.60e-01 | 79.0% | 75.8% |
| 3630975 | 632.1.1.25 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Med15_fungi | 0.51 | 40.0 | 3.76e-01 | 91.4% | 70.4% |
| 140397 | 2484.1.1.62 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PRP8_domainIV | 0.50 | 34.0 | 2.96e-01 | 98.1% | 45.6% |
D2
high
residues 91-141_197-255_278-296
D3
medium
residues 147-194