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AP018399.1__BBA65305.1__X__00157
Bact-VirAP018399.1__BBA65305.1__X__00157
Identity
- Accession:
- AP018399 ↗
- Kingdom:
- phage
Quality
91.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-23_88-196
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lssA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.91 | 87.0 | 6.26e-01 | 100.0% | 80.1% |
| 1atiB01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.88 | 83.0 | 6.15e-01 | 100.0% | 96.1% |
| 2pmeA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.88 | 83.0 | 6.09e-01 | 100.0% | 92.4% |
| 1g5hA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.83 | 78.0 | 5.92e-01 | 100.0% | 92.7% |
| 5mghA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.80 | 72.0 | 5.43e-01 | 97.7% | 79.2% |
| 3l4gC04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.75 | 68.0 | 5.31e-01 | 97.7% | 89.8% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.61 | 39.0 | 4.16e-01 | 99.2% | 73.5% |
| 2khdA00 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 32.0 | 3.52e-01 | 78.8% | 61.1% |
| 1hxdA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 51.0 | 4.47e-01 | 96.2% | 79.7% |
| 3klxB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 43.0 | 3.90e-01 | 80.3% | 84.5% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 39.0 | 3.95e-01 | 71.2% | 79.3% |
| 4r7kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 42.0 | 3.91e-01 | 78.8% | 81.0% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 41.0 | 3.83e-01 | 76.5% | 75.2% |
| 2petA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 34.0 | 3.66e-01 | 84.8% | 70.7% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 39.0 | 3.83e-01 | 73.5% | 78.7% |
| 2le1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 37.0 | 3.61e-01 | 70.5% | 78.1% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 39.0 | 3.72e-01 | 77.3% | 75.6% |
| 6serA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 41.0 | 3.43e-01 | 81.8% | 61.0% |
| 1xuvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 39.0 | 3.72e-01 | 79.5% | 83.4% |
| 4xrtA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 36.0 | 3.60e-01 | 72.7% | 81.7% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.50 | 41.0 | 3.78e-01 | 93.9% | 67.6% |
| 5hx0A00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.50 | 37.0 | 2.73e-01 | 76.5% | 100.0% |
| 2joeA01 | 3.30.1830.10 | Alpha Beta › 2-Layer Sandwich › YehR-like fold › YehR-like | 0.50 | 31.0 | 3.18e-01 | 87.1% | 62.5% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3056282 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.79 | 74.0 | 5.68e-01 | 100.0% | 86.0% |
| 4021057 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.76 | 69.0 | 5.34e-01 | 97.7% | 94.2% |
| 5008981 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.75 | 68.0 | 4.82e-01 | 97.7% | 62.1% |
| 3276465 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.65 | 49.0 | 4.24e-01 | 78.8% | 57.6% |
| 3193420 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.65 | 57.0 | 4.23e-01 | 95.5% | 62.7% |
| 3172478 | 708.1.1.30 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › PF30069, PF30070 | 0.63 | 43.0 | 4.04e-01 | 82.6% | 56.4% |
| 3642252 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.62 | 41.0 | 4.39e-01 | 72.0% | 79.1% |
| 3962288 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.60 | 45.0 | 4.56e-01 | 78.8% | 81.5% |
| 5053256 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.60 | 42.0 | 4.29e-01 | 75.0% | 75.2% |
| 3502573 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.59 | 33.0 | 3.61e-01 | 93.9% | 65.5% |
| 3807917 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.59 | 45.0 | 3.70e-01 | 80.3% | 62.9% |
| 3783203 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.59 | 33.0 | 3.57e-01 | 95.5% | 64.5% |
| 3269530 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.59 | 42.0 | 3.84e-01 | 80.3% | 55.4% |
| 4883183 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.58 | 44.0 | 4.08e-01 | 78.8% | 77.7% |
| 3618439 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.58 | 33.0 | 3.72e-01 | 87.1% | 72.0% |
| 3829548 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.58 | 41.0 | 4.15e-01 | 82.6% | 73.1% |
| 4117472 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.58 | 42.0 | 4.01e-01 | 76.5% | 79.4% |
| 3529448 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.57 | 37.0 | 4.14e-01 | 78.8% | 85.0% |
| 3490491 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.56 | 36.0 | 4.07e-01 | 75.8% | 87.4% |
| 3947246 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.56 | 41.0 | 3.65e-01 | 77.3% | 68.0% |
| 3939052 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.56 | 31.0 | 3.48e-01 | 93.9% | 67.6% |
| 3170044 | 331.2.1.7 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM1_C_vert_fung | 0.54 | 39.0 | 3.89e-01 | 75.0% | 83.6% |
| 3690138 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.54 | 31.0 | 3.35e-01 | 93.9% | 63.5% |
| 3277897 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.54 | 39.0 | 3.79e-01 | 75.0% | 82.0% |
| 143699 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.54 | 37.0 | 3.66e-01 | 70.5% | 82.5% |
| 3702931 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.54 | 39.0 | 3.70e-01 | 75.8% | 66.3% |
| 3191948 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.53 | 31.0 | 3.29e-01 | 94.7% | 62.5% |
| 1715836 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 39.0 | 3.72e-01 | 77.3% | 75.6% |
| 1715838 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.53 | 37.0 | 3.54e-01 | 72.0% | 76.1% |
| 3654098 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.53 | 41.0 | 3.68e-01 | 84.1% | 72.3% |
| 3163957 | 881.1.1.38 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27161 | 0.53 | 41.0 | 3.78e-01 | 82.6% | 80.6% |
| 3222359 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.53 | 37.0 | 4.02e-01 | 80.3% | 88.1% |
| 4672378 | 71.1.1.1 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin | 0.52 | 37.0 | 3.30e-01 | 72.7% | 89.2% |
| 5015520 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.52 | 38.0 | 3.28e-01 | 76.5% | 89.0% |
| 3702663 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 40.0 | 3.91e-01 | 81.1% | 75.9% |
| 3997567 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.52 | 33.0 | 2.98e-01 | 82.6% | 44.9% |
| 1715837 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.51 | 37.0 | 3.60e-01 | 75.8% | 85.3% |
| 3230937 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.51 | 32.0 | 3.43e-01 | 86.4% | 73.6% |
| 3744021 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.51 | 35.0 | 3.79e-01 | 75.8% | 84.5% |
| 3960325 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.51 | 31.0 | 3.35e-01 | 87.1% | 70.9% |
| 4962632 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.51 | 44.0 | 3.77e-01 | 94.7% | 76.7% |
| 3599881 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.50 | 39.0 | 3.78e-01 | 81.1% | 79.3% |
D2
medium
residues 24-87
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1httA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.80 | 72.0 | 4.69e-01 | 100.0% | 26.6% |
| 4g84A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.79 | 67.0 | 4.20e-01 | 100.0% | 18.0% |
| 3od1A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.76 | 67.0 | 4.28e-01 | 100.0% | 20.9% |
| 1qe0A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.75 | 66.0 | 4.20e-01 | 100.0% | 20.9% |
| 3netB01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.74 | 67.0 | 4.20e-01 | 100.0% | 20.5% |
| 3racA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.72 | 64.0 | 4.01e-01 | 100.0% | 20.1% |
| 1nyrA03 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.70 | 62.0 | 3.97e-01 | 100.0% | 22.5% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.70 | 63.0 | 4.35e-01 | 100.0% | 30.2% |
| 1z7mC00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.70 | 59.0 | 3.82e-01 | 100.0% | 20.2% |
| 2pmeA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.69 | 61.0 | 3.90e-01 | 100.0% | 21.6% |
| 2i4lA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.69 | 59.0 | 3.78e-01 | 100.0% | 20.6% |
| 3gr5A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.59 | 41.0 | 4.04e-01 | 73.4% | 89.7% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.57 | 39.0 | 4.03e-01 | 71.9% | 96.6% |
| 4g0bA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.55 | 38.0 | 2.69e-01 | 71.9% | 82.0% |
| 2uvaG03 | 3.30.70.3320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 48.0 | 4.07e-01 | 100.0% | 86.1% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.55 | 38.0 | 3.74e-01 | 75.0% | 85.9% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.55 | 38.0 | 2.91e-01 | 73.4% | 38.2% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.54 | 40.0 | 3.59e-01 | 81.2% | 75.8% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 38.0 | 3.74e-01 | 76.6% | 86.8% |
| 4g08A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 37.0 | 3.65e-01 | 75.0% | 85.7% |
| 2l9dA00 | 3.30.70.2340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF12112 family, DUF3579 | 0.53 | 41.0 | 3.62e-01 | 92.2% | 88.9% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.52 | 37.0 | 3.00e-01 | 78.1% | 91.8% |
| 2c42A05 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.05e-01 | 71.9% | 98.3% |
| 3tzyA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.52 | 42.0 | 4.17e-01 | 92.2% | 84.3% |
| 3ou2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 40.0 | 2.91e-01 | 89.1% | 75.0% |
| 3zrpA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 41.0 | 3.56e-01 | 98.4% | 78.2% |
| 1sjqA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 43.0 | 3.97e-01 | 100.0% | 93.2% |
| 1d8cA01 | 3.20.20.360 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Malate synthase, domain 3 | 0.51 | 38.0 | 2.40e-01 | 85.9% | 60.5% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 41.0 | 3.95e-01 | 93.8% | 93.3% |
| 3ofgB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 40.0 | 3.73e-01 | 93.8% | 90.8% |
| 1vx7000 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.50 | 34.0 | 3.48e-01 | 73.4% | 74.2% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940297 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.80 | 72.0 | 4.50e-01 | 100.0% | 20.6% |
| None | — | 0.80 | 72.0 | 4.47e-01 | 100.0% | 20.6% | |
| 4682278 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.80 | 72.0 | 4.47e-01 | 100.0% | 21.5% |
| 5036945 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.80 | 72.0 | 4.47e-01 | 100.0% | 20.3% |
| 4982886 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.79 | 71.0 | 4.44e-01 | 100.0% | 20.0% |
| None | — | 0.79 | 71.0 | 4.45e-01 | 100.0% | 22.2% | |
| 5030573 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.79 | 71.0 | 4.43e-01 | 100.0% | 20.3% |
| None | — | 0.79 | 71.0 | 4.48e-01 | 100.0% | 21.9% | |
| 4057053 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.79 | 72.0 | 4.46e-01 | 100.0% | 19.7% |
| None | — | 0.79 | 70.0 | 4.41e-01 | 100.0% | 20.6% | |
| 1714638 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.79 | 67.0 | 5.04e-01 | 100.0% | 39.2% |
| None | — | 0.79 | 71.0 | 4.48e-01 | 100.0% | 21.3% | |
| None | — | 0.79 | 71.0 | 4.46e-01 | 100.0% | 22.5% | |
| 4035814 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.79 | 70.0 | 4.43e-01 | 100.0% | 20.0% |
| 4255578 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.79 | 70.0 | 4.42e-01 | 100.0% | 20.9% |
| 4982299 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.79 | 70.0 | 4.50e-01 | 100.0% | 22.7% |
| 4197610 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.79 | 70.0 | 4.38e-01 | 100.0% | 20.0% |
| 4932527 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.79 | 69.0 | 4.33e-01 | 100.0% | 19.7% |
| None | — | 0.78 | 70.0 | 4.42e-01 | 100.0% | 20.9% | |
| None | — | 0.78 | 70.0 | 4.38e-01 | 100.0% | 21.5% | |
| 3835676 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.78 | 70.0 | 4.88e-01 | 100.0% | 34.0% |
| 5042743 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.78 | 69.0 | 4.44e-01 | 100.0% | 22.7% |
| 3987949 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.78 | 69.0 | 4.43e-01 | 100.0% | 21.3% |
| 4200674 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.78 | 69.0 | 4.34e-01 | 100.0% | 20.3% |
| 4040610 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.78 | 68.0 | 4.27e-01 | 100.0% | 19.1% |
| 4127388 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.78 | 68.0 | 4.31e-01 | 100.0% | 19.8% |
| 4673719 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.77 | 69.0 | 4.35e-01 | 100.0% | 19.7% |
| 3237847 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.77 | 68.0 | 4.19e-01 | 100.0% | 17.0% |
| 5033312 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.77 | 69.0 | 4.35e-01 | 100.0% | 20.9% |
| 4144531 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.77 | 70.0 | 4.37e-01 | 100.0% | 20.3% |
| 3258337 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.77 | 68.0 | 4.18e-01 | 100.0% | 17.0% |
| 4160081 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.77 | 68.0 | 4.29e-01 | 100.0% | 20.3% |
| 5058156 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.77 | 68.0 | 4.36e-01 | 100.0% | 22.0% |
| 4420091 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.77 | 69.0 | 4.68e-01 | 100.0% | 29.3% |
| 5072381 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.76 | 67.0 | 4.23e-01 | 100.0% | 20.3% |
| 4045230 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.76 | 67.0 | 4.25e-01 | 100.0% | 20.6% |
| 4938455 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.76 | 68.0 | 4.87e-01 | 100.0% | 36.8% |
| 5049190 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.76 | 68.0 | 4.11e-01 | 100.0% | 32.7% |
| 3394098 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.76 | 67.0 | 4.09e-01 | 100.0% | 16.6% |
| 5050788 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.76 | 68.0 | 4.22e-01 | 100.0% | 20.0% |
| None | — | 0.76 | 67.0 | 4.24e-01 | 100.0% | 20.3% | |
| None | — | 0.75 | 66.0 | 4.21e-01 | 100.0% | 20.3% | |
| None | — | 0.75 | 66.0 | 4.23e-01 | 100.0% | 20.3% | |
| 3796164 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.74 | 66.0 | 4.08e-01 | 100.0% | 17.6% |
| 4482701 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.74 | 66.0 | 4.27e-01 | 100.0% | 22.5% |
| 5037379 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.74 | 66.0 | 4.63e-01 | 100.0% | 32.5% |
| 3639430 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.71 | 62.0 | 3.76e-01 | 100.0% | 15.4% |
| 5054248 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.71 | 62.0 | 3.94e-01 | 100.0% | 20.6% |
| 4874950 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.70 | 61.0 | 4.64e-01 | 100.0% | 45.5% |
| 4417323 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.70 | 61.0 | 3.92e-01 | 100.0% | 22.5% |
| 3935811 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.69 | 60.0 | 3.85e-01 | 100.0% | 21.5% |
| 4545140 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.69 | 60.0 | 3.82e-01 | 100.0% | 21.5% |
| 4078886 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.69 | 60.0 | 3.73e-01 | 100.0% | 18.7% |
| 4308313 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.68 | 59.0 | 3.68e-01 | 100.0% | 18.2% |
| 4987106 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 45.0 | 3.98e-01 | 81.2% | 92.6% |
| 3966305 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.59 | 41.0 | 3.92e-01 | 73.4% | 88.0% |
| 3425660 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.57 | 40.0 | 3.53e-01 | 75.0% | 63.0% |
| 4137642 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.57 | 39.0 | 4.04e-01 | 73.4% | 90.0% |
| 3429635 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 38.0 | 3.46e-01 | 71.9% | 65.3% |
| 4119221 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.56 | 39.0 | 3.96e-01 | 75.0% | 92.3% |
| 3814794 | 327.11.2.36 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11 | 0.55 | 39.0 | 3.65e-01 | 75.0% | 86.3% |
| 4028506 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.55 | 43.0 | 2.77e-01 | 92.2% | 48.5% |
| 3594206 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 38.0 | 3.67e-01 | 78.1% | 81.0% |
| 4457759 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.52 | 36.0 | 3.37e-01 | 75.0% | 93.3% |
| 5042476 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.52 | 42.0 | 3.80e-01 | 93.8% | 89.5% |
| 3287283 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 38.0 | 3.22e-01 | 78.1% | 71.8% |
| 3591205 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 38.0 | 3.37e-01 | 81.2% | 71.0% |
| 4502459 | 304.24.1.4 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › RF3_C | 0.51 | 35.0 | 2.71e-01 | 70.3% | 96.4% |
| 5035757 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.51 | 42.0 | 3.64e-01 | 92.2% | 81.0% |