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AP018399.1__BBA65398.1__X__00250
Bact-VirAP018399.1__BBA65398.1__X__00250
Identity
- Accession:
- AP018399 ↗
- Kingdom:
- phage
Quality
64.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-156
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 35.0 | 4.97e-01 | 76.2% | 100.0% |
| 2ia7A00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 35.0 | 3.96e-01 | 90.2% | 60.4% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.62 | 34.0 | 4.20e-01 | 72.7% | 86.2% |
| 7jrmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 27.0 | 3.66e-01 | 84.6% | 81.1% |
| 3hxlA05 | 3.30.360.90 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.58 | 28.0 | 3.89e-01 | 83.9% | 94.2% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 40.0 | 4.51e-01 | 72.0% | 93.6% |
| 2ch9A01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 4.11e-01 | 74.1% | 90.3% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.53 | 39.0 | 3.95e-01 | 76.2% | 95.8% |
| 1tu5A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 4.01e-01 | 77.6% | 85.0% |
| 4kz1A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.52 | 37.0 | 3.83e-01 | 74.1% | 97.0% |
| 1qgwA00 | 3.90.510.10 | Alpha Beta › Alpha-Beta Complex › Cryptophytan Phycoerythrin (Alpha-1 Chain); Chain A › Phycoerythrin alpha chain | 0.51 | 26.0 | 3.33e-01 | 100.0% | 86.8% |
| 5dvyA01 | 3.10.450.100 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 | 0.51 | 38.0 | 4.03e-01 | 77.6% | 95.2% |
| 3hi7B02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 37.0 | 3.85e-01 | 76.9% | 84.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031480 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.67 | 34.0 | 4.21e-01 | 72.0% | 76.7% |
| 3668385 | 243.1.1.89 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF7074 | 0.66 | 40.0 | 4.94e-01 | 76.2% | 95.6% |
| 4987319 | 1036.1.1.2 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › PF29994 | 0.64 | 37.0 | 4.23e-01 | 92.3% | 75.5% |
| 3312688 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.62 | 25.0 | 2.91e-01 | 95.8% | 49.5% |
| 4942841 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.61 | 39.0 | 4.33e-01 | 73.4% | 80.0% |
| 3505900 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 38.0 | 4.36e-01 | 76.9% | 88.6% |
| 3505449 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 38.0 | 4.41e-01 | 74.8% | 94.0% |
| 3608271 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 45.0 | 3.44e-01 | 84.6% | 70.7% |
| 3510504 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 37.0 | 4.15e-01 | 74.1% | 85.5% |
| 3513207 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 36.0 | 4.08e-01 | 72.0% | 84.5% |
| 3404947 | 5.1.4.341 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd | 0.53 | 43.0 | 3.32e-01 | 86.0% | 69.5% |
| 3710638 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 36.0 | 3.39e-01 | 90.9% | 56.6% |