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AP018399.1__BBA65483.1__X__00335
Bact-VirAP018399.1__BBA65483.1__X__00335
Identity
- Accession:
- AP018399 ↗
- Kingdom:
- phage
Quality
95.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-76
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5mmjn01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 36.0 | 3.42e-01 | 86.5% | 55.1% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.54 | 37.0 | 3.52e-01 | 70.3% | 97.7% |
| 1is9A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.51 | 44.0 | 2.90e-01 | 100.0% | 37.2% |
| 3gt5A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.51 | 43.0 | 2.78e-01 | 98.6% | 53.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4557838 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.58 | 46.0 | 3.75e-01 | 87.8% | 62.9% |
| 4267038 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.51 | 43.0 | 3.36e-01 | 98.6% | 93.0% |
| 4276444 | 109.4.1.3238 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HopW1-1 | 0.51 | 43.0 | 2.97e-01 | 97.3% | 60.4% |
D2
high
residues 82-144
Domain cluster:
representative