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AP018399.1__BBA65511.1__X__00363
Bact-VirAP018399.1__BBA65511.1__X__00363
Identity
- Accession:
- AP018399 ↗
- Kingdom:
- phage
Quality
79.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-169
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 17.0 | 2.85e-01 | 90.2% | 61.4% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.59 | 41.0 | 4.39e-01 | 70.1% | 89.3% |
| 3nwsA01 | 2.40.50.800 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 28.0 | 2.97e-01 | 84.1% | 51.8% |
| 2k7iA01 | 3.30.160.160 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like | 0.52 | 17.0 | 3.19e-01 | 92.7% | 100.0% |
| 1hezE00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 20.0 | 3.18e-01 | 87.2% | 96.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028776 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 18.0 | 3.34e-01 | 80.5% | 82.0% |
| 3261464 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.61 | 36.0 | 4.26e-01 | 93.9% | 85.5% |
| 4467738 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.60 | 30.0 | 3.97e-01 | 81.1% | 87.8% |
| 3377237 | 109.4.1.1783 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28660 | 0.59 | 35.0 | 3.14e-01 | 100.0% | 40.9% |
| 3600731 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.58 | 32.0 | 3.77e-01 | 80.5% | 75.7% |
| 3172910 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.58 | 35.0 | 4.23e-01 | 92.1% | 92.4% |
| 3580347 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.57 | 37.0 | 4.40e-01 | 94.5% | 99.0% |
| 4935676 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.56 | 34.0 | 4.03e-01 | 93.3% | 88.2% |
| 3444544 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.56 | 39.0 | 3.99e-01 | 95.1% | 74.2% |
| 4933622 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.55 | 33.0 | 4.06e-01 | 94.5% | 96.0% |
| 3713159 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 34.0 | 3.84e-01 | 92.1% | 84.2% |
| 3610921 | 604.5.1.36 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › UPF0220 | 0.54 | 31.0 | 3.50e-01 | 92.1% | 72.3% |
| 3593719 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 40.0 | 3.85e-01 | 95.1% | 69.7% |
| 4195230 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 35.0 | 4.02e-01 | 97.0% | 95.0% |
| 3183787 | 3012.1.1.10 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › ISN1 | 0.50 | 26.0 | 3.23e-01 | 86.0% | 79.0% |