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AP018399.1__BBA65579.1__X__00431
Bact-VirAP018399.1__BBA65579.1__X__00431
Identity
- Accession:
- AP018399 ↗
- Kingdom:
- phage
Quality
77.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-102
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l1sA00 | 3.10.450.160 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr | 0.68 | 34.0 | 3.60e-01 | 94.7% | 53.0% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.64 | 55.0 | 5.18e-01 | 100.0% | 78.6% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.62 | 54.0 | 5.23e-01 | 100.0% | 85.6% |
| 2nwvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.62 | 53.0 | 5.08e-01 | 100.0% | 80.4% |
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 33.0 | 4.09e-01 | 94.7% | 100.0% |
| 3ipjA01 | 3.30.1360.60 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Glucose permease domain IIB | 0.58 | 34.0 | 3.65e-01 | 100.0% | 66.3% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 39.0 | 4.24e-01 | 78.7% | 88.2% |
| 1q7hA01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.56 | 33.0 | 3.85e-01 | 79.8% | 84.6% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.54 | 39.0 | 3.77e-01 | 98.9% | 66.7% |
| 3oc9A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 42.0 | 2.86e-01 | 88.3% | 82.0% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.53 | 42.0 | 3.82e-01 | 95.7% | 63.5% |
| 3x2xA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 38.0 | 2.83e-01 | 73.4% | 50.2% |
| 1u02A02 | 3.30.70.1020 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 | 0.53 | 36.0 | 4.00e-01 | 100.0% | 88.2% |
| 4uhiA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 44.0 | 2.91e-01 | 94.7% | 63.3% |
| 6n59A02 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 33.0 | 3.51e-01 | 100.0% | 72.6% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 44.0 | 3.85e-01 | 95.7% | 85.8% |
| 1d0nA06 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.52 | 40.0 | 3.65e-01 | 92.6% | 61.4% |
| 1tf1B00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 41.0 | 3.48e-01 | 92.6% | 99.4% |
| 8a5eD01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.46e-01 | 100.0% | 75.9% |
| 3akhA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 40.0 | 3.62e-01 | 88.3% | 98.5% |
| 5dx9A01 | 3.30.70.1020 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 | 0.50 | 33.0 | 3.64e-01 | 100.0% | 87.5% |
| 4ntqB00 | 3.30.2450.20 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.50 | 41.0 | 3.59e-01 | 89.4% | 93.1% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.50 | 30.0 | 3.41e-01 | 76.6% | 82.1% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5082882 | 3261.1.1.1 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON | 0.73 | 43.0 | 4.99e-01 | 100.0% | 84.6% |
| 4971247 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.67 | 50.0 | 5.39e-01 | 93.6% | 92.5% |
| 5063704 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 43.0 | 4.96e-01 | 78.7% | 96.9% |
| 3403609 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.63 | 43.0 | 4.57e-01 | 94.7% | 82.3% |
| 3386722 | 327.8.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GSPII protein E N-terminal domain-like › GSPII protein E N-terminal domain-like | 0.61 | 35.0 | 3.72e-01 | 97.9% | 63.7% |
| 4000550 | 632.7.1.26 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › Tim29 | 0.57 | 45.0 | 3.90e-01 | 88.3% | 67.7% |
| 3411894 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.56 | 38.0 | 4.10e-01 | 100.0% | 82.5% |
| 3971560 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.55 | 35.0 | 3.95e-01 | 100.0% | 90.8% |
| 5021241 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.55 | 33.0 | 3.70e-01 | 78.7% | 78.6% |
| 3596980 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.55 | 42.0 | 3.27e-01 | 80.9% | 43.4% |
| 4278847 | 327.10.1.11 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DNA_pol3_a_NII | 0.54 | 39.0 | 4.20e-01 | 100.0% | 90.0% |
| 4975963 | 213.1.1.29 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_9 | 0.53 | 36.0 | 2.71e-01 | 71.3% | 82.7% |
| 4970968 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.53 | 44.0 | 4.17e-01 | 93.6% | 84.1% |
| 4057632 | 3012.1.1.10 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › ISN1 | 0.52 | 37.0 | 3.91e-01 | 100.0% | 83.5% |
| 2966283 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.52 | 36.0 | 3.35e-01 | 96.8% | 56.3% |
| 3450849 | 1.1.1.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD | 0.52 | 39.0 | 3.64e-01 | 79.8% | 90.8% |
| 4992892 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.52 | 44.0 | 3.28e-01 | 98.9% | 84.1% |
| 3665792 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.51 | 38.0 | 3.55e-01 | 96.8% | 61.7% |
| 4998620 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.51 | 44.0 | 3.23e-01 | 100.0% | 83.2% |
| 2979310 | 205.1.1.23 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Nqo3_Fer4 | 0.51 | 33.0 | 3.42e-01 | 100.0% | 71.4% |
| 4939844 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.51 | 36.0 | 3.95e-01 | 88.3% | 100.0% |
| 4927211 | 223.2.1.62 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DUF6659 | 0.51 | 42.0 | 3.92e-01 | 94.7% | 98.3% |
| 4928738 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 41.0 | 3.80e-01 | 95.7% | 97.7% |