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AP018399.1__BBA65726.1__X__00578
Bact-VirAP018399.1__BBA65726.1__X__00578
Identity
- Accession:
- AP018399 ↗
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-160
Domain cluster:
rep: MN497415.1__QGH73801.1__X__00010__D3-143
D2
high
residues 180-281
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mlqH00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.59 | 25.0 | 3.57e-01 | 80.4% | 88.1% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 29.0 | 3.48e-01 | 89.2% | 80.6% |
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 27.0 | 3.27e-01 | 92.2% | 75.4% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 28.0 | 3.21e-01 | 100.0% | 70.8% |
| 1jv2B04 | 4.10.1240.30 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.51 | 25.0 | 2.74e-01 | 87.3% | 48.8% |
| 2oqbA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 39.0 | 3.92e-01 | 94.1% | 79.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4949848 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.61 | 28.0 | 3.69e-01 | 89.2% | 80.0% |
| 5025895 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 37.0 | 3.76e-01 | 100.0% | 65.7% |
| 4147366 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.53 | 23.0 | 3.32e-01 | 87.3% | 89.6% |
| 4028782 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.52 | 39.0 | 3.46e-01 | 81.4% | 75.5% |
| 3037102 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 26.0 | 3.11e-01 | 89.2% | 75.8% |