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AP018399.1__BBA65726.1__X__00578

Bact-Vir

AP018399.1__BBA65726.1__X__00578

Identity

Accession:
AP018399 ↗
Kingdom:
phage

Quality

87.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-160
PDB
D2 high residues 180-281
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mlqH00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 25.0 3.57e-01 80.4% 88.1%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 29.0 3.48e-01 89.2% 80.6%
1b69A00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.52 27.0 3.27e-01 92.2% 75.4%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 28.0 3.21e-01 100.0% 70.8%
1jv2B04 4.10.1240.30 Few Secondary Structures › Irregular › Hormone receptor fold › 0.51 25.0 2.74e-01 87.3% 48.8%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 39.0 3.92e-01 94.1% 79.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4949848 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.61 28.0 3.69e-01 89.2% 80.0%
5025895 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 37.0 3.76e-01 100.0% 65.7%
4147366 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.53 23.0 3.32e-01 87.3% 89.6%
4028782 2.1.1.25 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.52 39.0 3.46e-01 81.4% 75.5%
3037102 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 26.0 3.11e-01 89.2% 75.8%