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AP018463.1__BBC28672.1__X__00058
Bact-VirAP018463.1__BBC28672.1__X__00058
Identity
- Accession:
- AP018463 ↗
- Kingdom:
- phage
Quality
62.7
mean pLDDT
Taxonomy
TaxID: 2070497
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-93
D2
high
residues 103-174
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ztdA00 | 1.10.1520.20 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III | 0.61 | 42.0 | 3.55e-01 | 73.6% | 84.8% |
| 2e0zA01 | 3.30.2400.20 | Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › | 0.50 | 41.0 | 3.71e-01 | 94.4% | 71.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3259465 | 101.1.2.472 ↗ | alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 | 0.59 | 43.0 | 3.97e-01 | 77.8% | 63.2% |
| 4238842 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.59 | 51.0 | 3.35e-01 | 100.0% | 55.5% |
| 4657087 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.57 | 50.0 | 3.28e-01 | 100.0% | 55.5% |
| 3721411 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 41.0 | 4.04e-01 | 86.1% | 71.2% |
| 3611631 | 3559.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 | 0.54 | 39.0 | 3.37e-01 | 77.8% | 50.4% |
| 4466880 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.54 | 41.0 | 3.20e-01 | 83.3% | 38.7% |
| 3701475 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.51 | 43.0 | 3.45e-01 | 93.1% | 59.3% |