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AP019415.2__BBI47379.1__X__00048
Bact-VirAP019415.2__BBI47379.1__X__00048
Identity
- Accession:
- AP019415 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-65
Domain cluster:
rep: IMGVR_UViG_3300025326_000612-3300025326-Ga0209342_100263602__D92-144
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wimA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.71 | 49.0 | 4.31e-01 | 72.3% | 88.3% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.70 | 46.0 | 3.03e-01 | 75.4% | 16.5% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 49.0 | 4.45e-01 | 76.9% | 100.0% |
| 4bl7A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 31.0 | 2.70e-01 | 75.4% | 33.0% |
| 2d8yA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.53 | 39.0 | 3.90e-01 | 86.2% | 98.6% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.52 | 38.0 | 3.64e-01 | 83.1% | 80.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3457383 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.73 | 51.0 | 4.53e-01 | 72.3% | 88.9% |
| 3368659 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.72 | 49.0 | 4.58e-01 | 70.8% | 97.5% |
| 3430765 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.72 | 53.0 | 4.50e-01 | 81.5% | 50.0% |
| 3249848 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.71 | 50.0 | 4.56e-01 | 73.8% | 96.5% |
| 3666975 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.70 | 50.0 | 4.52e-01 | 73.8% | 97.6% |
| 3724405 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 49.0 | 4.52e-01 | 72.3% | 98.8% |
| 4011583 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.69 | 49.0 | 4.27e-01 | 73.8% | 85.3% |
| 3723227 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.67 | 48.0 | 4.47e-01 | 73.8% | 98.8% |
| 3692487 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.67 | 49.0 | 4.25e-01 | 78.5% | 85.0% |
| 3395502 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 40.0 | 4.35e-01 | 72.3% | 76.0% |
| 3380766 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.64 | 51.0 | 4.41e-01 | 86.2% | 87.0% |
| 3683169 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.63 | 52.0 | 4.46e-01 | 87.7% | 88.0% |
| 3791383 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 42.0 | 3.72e-01 | 76.9% | 47.4% |
| 4015130 | 6166.1.1.0 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 | 0.63 | 51.0 | 3.50e-01 | 90.8% | 64.7% |
| 3927940 | 304.36.1.2 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › RVT_1 | 0.62 | 32.0 | 2.75e-01 | 75.4% | 30.5% |
| 4056127 | 601.50.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar cap protein FliD helical bundle domain › Flagellar cap protein FliD helical bundle domain › FliD_C | 0.59 | 51.0 | 3.64e-01 | 95.4% | 73.5% |
| 4625359 | 7101.1.1.1 ↗ | extended segments › Prp8-binding region of SLU7 › Prp8-binding region of SLU7 › Prp8-binding region of SLU7 › Slu7 | 0.58 | 47.0 | 3.74e-01 | 100.0% | 44.6% |
| 3611219 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 44.0 | 2.67e-01 | 89.2% | 15.3% |
| 3249194 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 37.0 | 2.59e-01 | 92.3% | 23.9% |
| 4998314 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 41.0 | 4.25e-01 | 86.2% | 93.3% |
| 4967062 | 2008.1.1.222 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NotI | 0.52 | 41.0 | 2.90e-01 | 89.2% | 77.8% |