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AP019524.1__BBI90471.1__X__00079
Bact-VirAP019524.1__BBI90471.1__X__00079
Identity
- Accession:
- AP019524 ↗
- Kingdom:
- phage
Quality
50.2
mean pLDDT
Taxonomy
TaxID: 2547425
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 116-163
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00200__D32-79
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vq8W01 | 3.30.1390.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 | 0.71 | 59.0 | 4.83e-01 | 100.0% | 58.2% |
| 2oztA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.64 | 51.0 | 4.05e-01 | 100.0% | 83.1% |
| 2kmuA00 | 1.10.10.1460 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 40.0 | 3.90e-01 | 79.2% | 80.4% |
| 3ho7A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 45.0 | 3.67e-01 | 100.0% | 97.1% |
| 4lhsA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 40.0 | 3.05e-01 | 100.0% | 55.7% |
| 3ezjA03 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 37.0 | 3.67e-01 | 87.5% | 94.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4952214 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.64 | 52.0 | 4.67e-01 | 100.0% | 84.0% |
| 3886438 | 3226.1.1.3 ↗ | alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › HCO3_cotransp | 0.61 | 49.0 | 2.81e-01 | 95.8% | 71.6% |
| 4094863 | 304.4.1.60 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › UPF0228 | 0.57 | 47.0 | 4.11e-01 | 100.0% | 97.5% |
| 5009121 | 304.8.1.100 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › UPF0228 | 0.57 | 46.0 | 4.09e-01 | 100.0% | 97.5% |
| 3760851 | 3226.1.1.3 ↗ | alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › HCO3_cotransp | 0.53 | 40.0 | 2.36e-01 | 100.0% | 8.2% |
| 3286553 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.52 | 36.0 | 3.38e-01 | 79.2% | 95.7% |
D2
medium
residues 1-108