←Back to structures

AP019524.1__BBI90697.1__X__00305

Bact-Vir

AP019524.1__BBI90697.1__X__00305

Identity

Accession:
AP019524 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Shirahamavirus› Tenacibaculum_phage_PTm1

TaxID: 2547425

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-53
PDB
Domain cluster: rep: CAKLQH020000022.1__CAH1092050.1__SAMEA5780036_02877__00050__D143-214
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hjzA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.88 81.0 5.40e-01 100.0% 32.2%
3bkhA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.87 80.0 5.34e-01 100.0% 34.6%
1qsaA03 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.87 79.0 5.39e-01 100.0% 33.5%
4c5fA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.85 77.0 5.31e-01 100.0% 35.7%
6cfcA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.85 77.0 5.34e-01 100.0% 36.0%
4yibA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.83 76.0 5.26e-01 100.0% 34.2%
2dqaA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.83 74.0 5.58e-01 100.0% 47.2%
1xsfA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.79 69.0 5.52e-01 100.0% 50.0%
6v3zA00 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.67 58.0 4.03e-01 100.0% 29.8%
5c9iD01 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.58 40.0 2.91e-01 73.6% 75.2%
4bthA00 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.54 37.0 2.71e-01 73.6% 69.5%
1lj8A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.51 41.0 2.90e-01 100.0% 47.8%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3838879 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.91 84.0 5.90e-01 100.0% 40.9%
3978377 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.90 76.0 4.98e-01 100.0% 24.6%
3582448 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.90 76.0 5.54e-01 100.0% 36.9%
4164050 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.90 75.0 4.90e-01 100.0% 23.4%
3945171 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.89 78.0 5.50e-01 100.0% 34.5%
4321901 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.88 74.0 4.95e-01 100.0% 25.9%
3587369 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.88 66.0 6.09e-01 100.0% 64.6%
4258903 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.87 80.0 5.48e-01 100.0% 35.8%
4530587 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.87 79.0 5.28e-01 100.0% 31.9%
2647598 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.86 78.0 5.27e-01 100.0% 34.6%
3941811 235.1.1.32 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 0.86 79.0 5.39e-01 100.0% 34.1%
3166094 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.86 78.0 5.32e-01 100.0% 34.3%
4515466 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.86 78.0 5.28e-01 100.0% 33.3%
4031083 235.1.1.14 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas 0.86 79.0 6.79e-01 100.0% 70.0%
2393514 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.86 78.0 5.20e-01 100.0% 31.1%
3971115 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 72.0 4.93e-01 100.0% 28.8%
3944103 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 71.0 4.78e-01 100.0% 26.7%
4995668 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 77.0 5.78e-01 100.0% 46.3%
3385979 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 76.0 5.11e-01 100.0% 28.4%
3839661 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 77.0 5.25e-01 100.0% 33.5%
3254511 235.1.1.1 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.84 76.0 6.01e-01 100.0% 51.4%
3964630 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 72.0 4.99e-01 100.0% 30.5%
3969917 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.83 75.0 4.96e-01 100.0% 27.0%
185214 235.1.1.14 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas 0.83 74.0 6.25e-01 100.0% 61.4%
3389460 235.1.1.12 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase 0.83 75.0 5.46e-01 100.0% 46.7%
3965879 235.1.1.32 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 0.83 76.0 5.20e-01 100.0% 32.7%
5028353 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 73.0 4.99e-01 100.0% 40.0%
4455133 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.81 60.0 5.07e-01 100.0% 47.7%
3979308 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.81 73.0 4.99e-01 100.0% 31.4%
4864324 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.80 65.0 4.77e-01 90.6% 36.0%
3657952 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.78 68.0 4.58e-01 100.0% 30.0%
D2 medium residues 54-135
PDB
Domain cluster: rep: LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00138__D190-275