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AP019525.1__BBI90712.1__X__00012
Bact-VirAP019525.1__BBI90712.1__X__00012
Identity
- Accession:
- AP019525 ↗
- Kingdom:
- phage
Quality
70.2
mean pLDDT
Taxonomy
TaxID: 2547426
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-70
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.66 | 47.0 | 2.84e-01 | 75.4% | 57.1% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.63 | 38.0 | 4.23e-01 | 80.3% | 80.4% |
| 2v0uA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 38.0 | 2.98e-01 | 80.3% | 26.0% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 41.0 | 2.86e-01 | 77.0% | 61.2% |
| 3e38A02 | 2.60.40.3090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 31.0 | 2.87e-01 | 75.4% | 39.2% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 40.0 | 2.83e-01 | 78.7% | 78.3% |
| 4hoiB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 39.0 | 3.23e-01 | 77.0% | 72.8% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.55 | 37.0 | 2.77e-01 | 100.0% | 28.3% |
| 3moiA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 43.0 | 3.08e-01 | 91.8% | 88.8% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 39.0 | 3.16e-01 | 78.7% | 70.3% |
| 2iqiB00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.53 | 41.0 | 3.04e-01 | 86.9% | 93.6% |
| 7c51A01 | 3.30.70.2970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 | 0.52 | 45.0 | 3.74e-01 | 100.0% | 57.7% |
| 5c94A00 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.52 | 33.0 | 2.73e-01 | 93.4% | 32.8% |
| 2znhA03 | 6.20.40.10 | Special › Other non-globular › Porin MspA ribbon fold › | 0.51 | 35.0 | 3.89e-01 | 82.0% | 93.6% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995818 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.87 | 75.0 | 5.81e-01 | 100.0% | 45.6% |
| 2074267 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.65 | 58.0 | 4.25e-01 | 100.0% | 85.0% |
| 3802659 | 304.8.1.66 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7049 | 0.61 | 44.0 | 3.67e-01 | 100.0% | 44.8% |
| 4971267 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.58 | 44.0 | 3.47e-01 | 100.0% | 37.7% |
| 3503044 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.58 | 47.0 | 3.38e-01 | 100.0% | 29.7% |
| 4156749 | 3234.1.1.2 ↗ | a+b two layers › GerBC protein › GerBC protein › GerBC protein › Spore_GerAC, Spore_GerAC_N | 0.57 | 44.0 | 2.93e-01 | 100.0% | 18.9% |
| 3608292 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.57 | 40.0 | 3.70e-01 | 98.4% | 57.5% |
| 5026790 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.56 | 42.0 | 3.59e-01 | 80.3% | 80.0% |
| 4979177 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.55 | 40.0 | 3.41e-01 | 77.0% | 79.0% |
| 4934212 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.55 | 41.0 | 3.51e-01 | 78.7% | 84.2% |
| 3613897 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.55 | 36.0 | 3.53e-01 | 100.0% | 61.5% |
| 5038748 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.54 | 39.0 | 3.17e-01 | 98.4% | 39.2% |
| 5029814 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.54 | 36.0 | 3.59e-01 | 78.7% | 66.2% |
| 4939141 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.52 | 36.0 | 2.72e-01 | 100.0% | 27.3% |
| 3969252 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.52 | 37.0 | 2.94e-01 | 98.4% | 34.8% |
| 5022396 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.52 | 30.0 | 2.78e-01 | 85.2% | 37.5% |
| 4266983 | 304.48.1.32 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD | 0.52 | 37.0 | 2.82e-01 | 100.0% | 29.1% |
| 3767941 | 220.1.1.115 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_19 | 0.52 | 38.0 | 3.06e-01 | 80.3% | 57.7% |
| 4614530 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.52 | 36.0 | 2.87e-01 | 98.4% | 36.7% |
| 3507800 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.51 | 44.0 | 2.77e-01 | 96.7% | 98.3% |
| 4101838 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.51 | 44.0 | 3.72e-01 | 100.0% | 56.4% |
| 4929310 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.51 | 43.0 | 3.64e-01 | 100.0% | 57.3% |
| 5058189 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.50 | 43.0 | 3.68e-01 | 100.0% | 59.0% |
| 4948199 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.50 | 36.0 | 3.14e-01 | 83.6% | 49.5% |
| 4951176 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.50 | 43.0 | 3.43e-01 | 100.0% | 72.3% |
| 5024914 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.50 | 41.0 | 3.65e-01 | 98.4% | 63.5% |