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AP019527.1__BBI90376.1__X__00074

Bact-Vir

AP019527.1__BBI90376.1__X__00074

Identity

Accession:
AP019527 ↗
Kingdom:
phage

Quality

72.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Teubervirus› Lactococcus_phage_phiQ1

TaxID: 2488571

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-69
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pn0C00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.59 49.0 3.46e-01 100.0% 48.4%
1i8nA00 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.54 34.0 3.20e-01 71.0% 49.4%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4126506 375.1.1.128 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT 0.64 45.0 5.04e-01 79.7% 100.0%
3591392 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 42.0 4.80e-01 71.0% 98.0%
3813055 2003.1.5.19 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.60 41.0 2.58e-01 71.0% 12.3%
4334910 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.57 43.0 3.55e-01 81.2% 66.4%
3609075 375.1.1.4 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RanBP 0.50 44.0 3.86e-01 95.7% 89.0%
4979649 2003.1.5.19 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.50 42.0 2.74e-01 100.0% 75.8%