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ATP-dependent_DNA_ligase

Euk-Vir

Lausannevirus

ATP-dependent_DNA_ligase__YP_004347077__Lausannevirus__999883

Identity

Accession:
YP_004347077 ↗
Protein ID:
ATP-dependent_DNA_ligase
Kingdom:
euk

Quality

80.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Losannavirus› Lausannevirus

TaxID: 999883

Cluster

View cluster (52 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-107
PDB
Domain cluster: rep: ATP-dependent_DNA_ligase__YP_009001365__Pithovirus_sibericum__1450746__D54-157
D2 high residues 337-418
PDB
Domain cluster: rep: MK256384.1__QBA85097.1__X__00002__D37-130
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14743.13 best DNA_ligase_OB_2 39.8 4.90e-10 85.4% 86.4%
D3 medium residues 129-167_288-334
PDB
Domain cluster: rep: ON649702__UVF62572.1__X__00095__D231-262_382-434
D4 medium residues 168-287
PDB
Domain cluster: rep: ATP-dependent_DNA_ligase__YP_009094561__Melbournevirus__1560514__D164-283
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01068.27 best DNA_ligase_A_M 38.5 1.40e-09 95.8% 46.1%